RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SESN1Q9Y6P5 492 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 IGKV6-21A0A0C4DH24 114 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 CLDN11O75508 207 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 LRG1P02750 347 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 CSTF2P33240 577 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP43-201ENST00000285199 PIGAP37287 484 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 MLLT10P55197 1068 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 LCN1P1Q5VSP4 162 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 KIAA1161Q6NSJ0 714 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 CADM3Q8N126 398 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 SLC2A13Q96QE2 648 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 PLAC1Q9HBJ0 212 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 IL1RAPQ9NPH3 570 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 TMEM138Q9NPI0 162 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 KCTD5Q9NXV2 234 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 NUFIP1Q9UHK0 495 aaKnown RBP15.29■□□□□ 0.04
USP43-201ENST00000285199 PCDHB1Q9Y5F3 818 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 PPP2R3BQ9Y5P8 575 aa15.29■□□□□ 0.04
USP43-201ENST00000285199 TLL1O43897 1013 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 EEDO75530 441 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 CCNDBP1O95273 360 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 PFKLP17858 780 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 RORCP51449 518 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 SUZ12Q15022 739 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 SNAP47Q5SQN1 464 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 PIANPQ8IYJ0 282 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 MTMR14Q8NCE2 650 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 RAET1EQ8TD07 263 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 EGLN2Q96KS0 407 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 NECTIN4Q96NY8 510 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 MMP27Q9H306 513 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 RAD18Q9NS91 495 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ASF1AQ9Y294 204 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 N6AMT1Q9Y5N5 214 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 IGKV6D-21A0A0A0MT36 114 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 MANBAO00462 879 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CTDSP2O14595 271 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 TOXO94900 526 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 OR5F1O95221 314 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 PRPS2P11908 318 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 BMP4P12644 408 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 NPRL3Q12980 569 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ZNF267Q14586 743 aaPredicted RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 ERICH5Q6P6B1 374 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ZFAND4Q86XD8 727 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 DCP2Q8IU60 420 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 MFSD6LQ8IWD5 586 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CLECL1Q8IZS7 167 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ZNF433Q8N7K0 673 aaPredicted RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 TCEANCQ8N8B7 351 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 MGLLQ99685 303 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ZNF487B1APH4 448 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 SLC30A4O14863 429 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 DYRK3O43781 588 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 SERPINB7O75635 380 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 YES1P07947 543 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 SLC2A2P11168 524 aaPredicted RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 PRG2P13727 222 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CLK3P49761 638 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 PCDH1Q08174 1060 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 ABHD18Q0P651 414 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 IDNKQ5T6J7 187 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 IPCEF1Q8WWN9 437 aaPredicted RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 TADA1Q96BN2 335 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
USP43-201ENST00000285199 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CHURC1-FNTBB4DL54 471 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 H7C4K7 107 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 AP1G1O43747 822 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 UGT2B17O75795 530 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CAPN15O75808 1086 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 KDELR2P33947 212 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 CERS6Q6ZMG9 384 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 MINDY2Q8NBR6 621 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 RAB8BQ92930 207 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 EMILIN2Q9BXX0 1053 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 OSER1Q9NX31 292 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 AHSPQ9NZD4 102 aa15.28■□□□□ 0.04
USP43-201ENST00000285199 NFKBIEO00221 500 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 GSRP00390 522 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 ATP4BP51164 291 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 SOWAHCQ53LP3 525 aaPredicted RBP15.27■□□□□ 0.04
USP43-201ENST00000285199 PIK3R6Q5UE93 754 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 AMIGO1Q86WK6 493 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 TMEM151AQ8N4L1 468 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 NFKBIDQ8NI38 313 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 ALPK1Q96QP1 1244 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 TMED9Q9BVK6 235 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 BOCQ9BWV1 1114 aa15.27■□□□□ 0.04
USP43-201ENST00000285199 ZNF717Q9BY31 904 aaPredicted RBP15.27■□□□□ 0.04
USP43-201ENST00000285199 INTS6Q9UL03 887 aaKnown RBP15.27■□□□□ 0.04
USP43-201ENST00000285199 TRAV6A0A075B6T7 132 aa15.27■□□□□ 0.03
USP43-201ENST00000285199 PGRMC2O15173 223 aa15.27■□□□□ 0.03
USP43-201ENST00000285199 DHFRP00374 187 aa15.27■□□□□ 0.03
USP43-201ENST00000285199 DCDC1P59894 354 aa15.27■□□□□ 0.03
USP43-201ENST00000285199 MEF2AQ02078 507 aaPredicted RBP15.27■□□□□ 0.03
USP43-201ENST00000285199 RPL6Q02878 288 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms