RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 OR4F6Q8NGB9 312 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ZUFSPQ96AP4 578 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 YIPF4Q9BSR8 244 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 TAS2R9Q9NYW1 312 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 MATN4O95460 622 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 EPHX1P07099 455 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 CPN2P22792 545 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 PPM1AP35813 382 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 CTU1Q7Z7A3 348 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 TMC8Q8IU68 726 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 HAVCR1Q96D42 359 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ZNF641Q96N77 438 aaPredicted RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 SOX17Q9H6I2 414 aaPredicted RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 SACM1LQ9NTJ5 587 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ZCCHC3Q9NUD5 404 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 MTX2O75431 263 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PPP5CP53041 499 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 IQCF2Q8IXL9 164 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 ZBED6CLQ96FA7 236 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 RDH12Q96NR8 316 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC35A5Q9BS91 424 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 STOX2Q9P2F5 926 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 TLR4O00206 839 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PCSK2P16519 638 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 AP2S1P53680 142 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SP2Q02086 613 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SPANXN4Q5MJ08 99 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PSRC1Q6PGN9 363 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 MOCOSQ96EN8 888 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC45A3Q96JT2 553 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 LMLNQ96KR4 655 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 RNF6Q9Y252 685 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 TLR6Q9Y2C9 796 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 MAB21L2Q9Y586 359 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 ELNP15502 786 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 FOXM1Q08050 763 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 JPH3Q8WXH2 748 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC6A15Q9H2J7 730 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 CALML5Q9NZT1 146 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 IFT52Q9Y366 437 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 CARNS1A5YM72 827 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 CREG1O75629 220 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 PAPSS2O95340 614 aaPredicted RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 INHBEP58166 350 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 MC1RQ01726 317 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SNAP47Q5SQN1 464 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 DUS1LQ6P1R4 473 aaKnown RBP16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 SLITRK4Q8IW52 837 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 C7orf57Q8NEG2 295 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 ATP6V1C2Q8NEY4 427 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 NKD1Q969G9 470 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 CCDC115Q96NT0 180 aa16.05■□□□□ 0.16
SH3RF1-201ENST00000284637 ANXA2P2A6NMY6 339 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 NUAK1O60285 661 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ANXA2P07355 339 aaKnown RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ELK4P28324 431 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ERP29P30040 261 aaKnown RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ACVRL1P37023 503 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 PNLIPRP1P54315 467 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SP3Q02447 781 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 KBTBD6Q86V97 674 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 MUS81Q96NY9 551 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC22A14Q9Y267 594 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC38A8A6NNN8 435 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 TMEM236Q5W0B7 351 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 MARCH9Q86YJ5 346 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 CLDN19Q8N6F1 224 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 C1orf52Q8N6N3 182 aaKnown RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 BCO2Q9BYV7 579 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 OSBPL2Q9H1P3 480 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ITM2CQ9NQX7 267 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SMIM30A4D0T7 59 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SYN3O14994 580 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 PTTG1O95997 202 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 PRNPP04156 253 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 SCNN1AP37088 669 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 GNALP38405 381 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 HCAR3P49019 387 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 BMXP51813 675 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 CEBPGP53567 150 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 CRISP3P54108 245 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 GET4Q7L5D6 327 aaPredicted RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 LYSMD3Q7Z3D4 306 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 OR6K6Q8NGW6 343 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 TMIGD2Q96BF3 282 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 PRR11Q96HE9 360 aaPredicted RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 TCF7L1Q9HCS4 588 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 LOC730098B7Z3J9 87 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 PLOD2O00469 737 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms