RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SUSD1Q6UWL2 747 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SERPINA11Q86U17 422 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 ANKRD13BQ86YJ7 626 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 DCP2Q8IU60 420 aaKnown RBP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 ZC3H7AQ8IWR0 971 aaKnown RBP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 FAM217AQ8IXS0 508 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SLC44A3Q8N4M1 653 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 LKAAEAR1Q8TD35 194 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 FKBP10Q96AY3 582 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 HHIPQ96QV1 700 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 ZFP14Q9HCL3 533 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SERHLQ9NQF3 203 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SOBPA7XYQ1 873 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 IRF1P10914 325 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 IMPDH2P12268 514 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 BPIP17213 487 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 CD247P20963 164 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 PIGAP37287 484 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 CSKP41240 450 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ARHGDIAP52565 204 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 PLIN5Q00G26 463 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TDGQ13569 410 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 VEPH1Q14D04 833 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ACOX1Q15067 660 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ZDHHC20Q5W0Z9 365 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 C16orf87Q6PH81 154 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 GCNT7Q6ZNI0 430 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 CLDN19Q8N6F1 224 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 BEND7Q8N7W2 519 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-201ENST00000277198 BPIFB6Q8NFQ5 453 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 CHPT1Q8WUD6 406 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 NCLNQ969V3 563 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 CMTM7Q96FZ5 175 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 NODALQ96S42 347 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 PLA2G2FQ9BZM2 168 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 FARSBQ9NSD9 589 aaKnown RBP12.54□□□□□ -0.4
C9orf3-201ENST00000277198 BAG5Q9UL15 447 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF318Q5VUA4 2279 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 A0A1W2PRU2 124 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 SLC1A7O00341 560 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 HS6ST1O60243 411 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 PRMT3O60678 531 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 SERPINA1P01009 418 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 C8GP07360 202 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 IL7RP16871 459 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 HNF1BP35680 557 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TRPC1P48995 793 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 RPIAP49247 311 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 VAC14Q08AM6 782 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 KEAP1Q14145 624 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TEAD2Q15562 447 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 MEP1AQ16819 746 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 DCDC5Q6ZRR9 648 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 DET1Q7L5Y6 550 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 DNAJB7Q7Z6W7 309 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-201ENST00000277198 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
C9orf3-201ENST00000277198 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 L3MBTL4Q8NA19 623 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 PIK3C3Q8NEB9 887 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 NETO1Q8TDF5 533 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 NUDT8Q8WV74 236 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ITFG2Q969R8 447 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 SLC12A9Q9BXP2 914 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ACPTQ9BZG2 426 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ASAH2Q9NR71 780 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ZDHHC3Q9NYG2 299 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ENPP5Q9UJA9 477 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF510Q9Y2H8 683 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 AP1M2Q9Y6Q5 423 aa12.54□□□□□ -0.4
C9orf3-201ENST00000277198 VPS13AQ96RL7 3174 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 A0A0U1RQS6 177 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 C2orf78A6NCI8 922 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 AREL1O15033 823 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 SLC16A5O15375 505 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 MAGEB3O15480 346 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 NOBOXO60393 691 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 CLDN7O95471 211 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-201ENST00000277198 HTR1AP08908 422 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 JUNDP17535 347 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 ITGB6P18564 788 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 PCMT1P22061 227 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 FCARP24071 287 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 PTPN6P29350 595 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 IST1P53990 364 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 EPHA5P54756 1037 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 SP140Q13342 867 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 CHRNA6Q15825 494 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms