RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 RMND5AQ9H871 391 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SERHLQ9NQF3 203 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PHPT1Q9NRX4 125 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SLC25A37Q9NYZ2 338 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SH2B3Q9UQQ2 575 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 AP3M1Q9Y2T2 418 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 CKAP5Q14008 2032 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 A0A096LPI6 279 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 A0A1W2PQF6 199 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 A0A1W2PQU0 124 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 KANSL1LA0AUZ9 987 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 KLHL33A6NCF5 533 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 EIF4E1BA6NMX2 242 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 FOXE1O00358 373 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 RNGTTO60942 597 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MYO1DO94832 1006 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 LRATO95237 230 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ETHE1O95571 254 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 KLF8O95600 359 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 BMP2P12643 396 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF26P17031 533 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 COL9A1P20849 921 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PSMA4P25789 261 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SOX11P35716 441 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 HNRNPFP52597 415 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 RPS13P62277 151 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 RAE1P78406 368 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ACSM2AQ08AH3 577 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MED21Q13503 144 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 LAPTM5Q13571 262 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PON2Q15165 354 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 HIST2H2ACQ16777 129 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 CYP51A1Q16850 503 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ACSM2BQ68CK6 577 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 HIST2H2AA3Q6FI13 130 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ADNP2Q6IQ32 1131 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 KIAA1161Q6NSJ0 714 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ERMP1Q7Z2K6 904 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GPR180Q86V85 440 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TDHQ8IZJ6 230 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GALNT4Q8N4A0 578 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ANKFN1Q8N957 763 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GFM2Q969S9 779 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PPWD1Q96BP3 646 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 IL17FQ96PD4 163 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 EFCAB11Q9BUY7 163 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 EBPLQ9BY08 206 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 OSBPL6Q9BZF3 934 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 COQ10BQ9H8M1 238 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 FBRSQ9HAH7 460 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 CCDC177Q9NQR7 707 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ACSL5Q9ULC5 683 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 AURKCQ9UQB9 309 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PCDHB14Q9Y5E9 798 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TRPM6Q9BX84 2022 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MYO9BQ13459 2157 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3DA0A087WVF3 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3IA0A087WXS9 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3EA0A087X179 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3KA0A087X1G2 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3FA6NER0 549 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 PRR23AA6NEV1 266 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3LB9A6J9 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 H0YJX3 145 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 AKAP10O43572 662 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 DENRO43583 198 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 RPN2P04844 631 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3HP0C7X1 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 GGT1P19440 569 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 C21orf58P58505 322 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 PRKCQQ04759 706 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 DMPKQ09013 629 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 MTAPQ13126 283 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 SLBPQ14493 270 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 ARHGAP19Q14CB8 494 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 SF1Q15637 639 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 DPY19L1Q2PZI1 675 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 GTDC1Q4AE62 458 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 PAGE2BQ5JRK9 111 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 C10orf62Q5T681 223 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 THEMIS2Q5TEJ8 643 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3GQ6DHY5 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 CAPRIN2Q6IMN6 1127 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3CQ6IPX1 549 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 LCTLQ6UWM7 567 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 DCUN1D3Q8IWE4 304 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D3Q8IZP1 549 aaPredicted RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 C1orf52Q8N6N3 182 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 OR7A2PQ8NGA2 310 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 SLC5A11Q8WWX8 675 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 EME1Q96AY2 570 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 INPP5KQ9BT40 448 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 IKZF5Q9H5V7 419 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 RPF2Q9H7B2 306 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TRPV5Q9NQA5 729 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms