RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 GLOD5A6NK44 160 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 ALPPL2P10696 532 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 G6PDP11413 515 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 MEF2AQ02078 507 aaPredicted RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 DAG1Q14118 895 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ODF4Q2M2E3 257 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 GOLGA7Q7Z5G4 137 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PEBP4Q96S96 227 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ZSCAN5AQ9BUG6 496 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SPATA7Q9P0W8 599 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 M0QX08 132 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TYRP1P17643 537 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PRKACGP22612 351 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 NPTX1Q15818 432 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 EIPR1Q53HC9 387 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ADNP2Q6IQ32 1131 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ZNF627Q7L945 461 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ZNF676Q8N7Q3 588 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 NFKBIDQ8NI38 313 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 KCTD13Q8WZ19 329 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 CST11Q9H112 138 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ITM2CQ9NQX7 267 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PEX16Q9Y5Y5 336 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PSAT1Q9Y617 370 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 KAT6AQ92794 2004 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TRBC2A0A5B9 178 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 M0R2N6 131 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SLC6A9P48067 706 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 AP2S1P53680 142 aaPredicted RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 ID2Q02363 134 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 RABL3Q5HYI8 236 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 ASB18Q6ZVZ8 466 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SAMD14Q8IZD0 417 aaPredicted RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 HAVCR1Q96D42 359 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 BCO2Q9BYV7 579 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 FETUBQ9UGM5 382 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SIX4Q9UIU6 781 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SLC35F4A4IF30 521 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PRMT3O60678 531 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 CXCR1P25024 350 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TYSND1Q2T9J0 566 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SPATC1Q76KD6 591 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 OXR1Q8N573 874 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 FBXL18Q96ME1 805 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SMOC2Q9H3U7 446 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 FBRSL1Q9HCM7 1045 aaKnown RBP11.17□□□□□ -0.62
USP53-201ENST00000274030 GIN1Q9NXP7 522 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TELO2Q9Y4R8 837 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TEX264Q9Y6I9 313 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 ZNF208O43345 1280 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SOX14O95416 240 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 RENP00797 406 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 CYP11A1P05108 521 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PSKH1P11801 424 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 CDH1P12830 882 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 OR12D2P58182 307 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 TAS2R50P59544 299 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 C14orf80Q86SX3 495 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 RAB11FIP5Q9BXF6 653 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 MCCC2Q9HCC0 563 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 P2RX2Q9UBL9 471 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 SCML2Q9UQR0 700 aa11.17□□□□□ -0.62
USP53-201ENST00000274030 DUXAA6NLW8 204 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 VIPR1P32241 457 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 EIF1AXP47813 144 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 NRIP1P48552 1158 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 GSK3BP49841 420 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 COLEC12Q5KU26 742 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 BRAT1Q6PJG6 821 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 CEACAM20Q6UY09 585 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ABHD13Q7L211 337 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 RASGRP3Q8IV61 690 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 IGDCC3Q8IVU1 814 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PROKR2Q8NFJ6 384 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 SLC22A18Q96BI1 424 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 HIST1H2AAQ96QV6 131 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 SEC61A2Q9H9S3 476 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 USP29Q9HBJ7 922 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 TAS2R7Q9NYW3 318 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 RHCGQ9UBD6 479 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ABLIM1O14639 778 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ANXA8P13928 327 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ACADLP28330 430 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 HOXD13P35453 343 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 RPS13P62277 151 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 CD47Q08722 323 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 SPANXN4Q5MJ08 99 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms