RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PLOD3O60568 738 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 NDUFS3O75489 264 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 AP2A2O94973 939 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 CLEC2LP0C7M8 214 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 ADORA3P0DMS8 318 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 DDCP20711 480 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 HSPA7P48741 367 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RAD51Q06609 339 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 ELP6Q0PNE2 266 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 QPRTQ15274 297 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SLC46A3Q7Z3Q1 461 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 ZNF605Q86T29 641 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 GPSM1Q86YR5 675 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 ESX1Q8N693 406 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 OR4F6Q8NGB9 312 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 GTPBP3Q969Y2 492 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 LINGO1Q96FE5 620 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 EGFL8Q99944 293 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 REEP1Q9H902 201 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 THUMPD1Q9NXG2 353 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 AFF4Q9UHB7 1163 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 DUSP12Q9UNI6 340 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 A0A0B4J293 547 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 PLD2O14939 933 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 APOL3O95236 402 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 CDKN2CP42773 168 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 OR1E2P47887 323 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 TAF6P49848 677 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 IHHQ14623 411 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SIRPB2Q5JXA9 342 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 MARCH8Q5T0T0 291 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SCN4BQ8IWT1 228 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 APH1BQ8WW43 257 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RNF31Q96EP0 1072 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RNF170Q96K19 258 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 UBQLN1Q9UMX0 589 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 WDR81Q562E7 1941 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 PSMD3O43242 534 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 DARSP14868 501 aaKnown RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 ENPP1P22413 925 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 ACVR2AP27037 513 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 RUNX1T1Q06455 604 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 VEPH1Q14D04 833 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 RFX4Q33E94 735 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 TUBA3EQ6PEY2 450 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 PLET1Q6UQ28 207 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 DENND1CQ8IV53 801 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 TNIP3Q96KP6 325 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 CCNB1IP1Q9NPC3 277 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 C1orf109Q9NX04 203 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 MS4A12Q9NXJ0 267 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 SNX7Q9UNH6 387 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 DOCK3Q8IZD9 2030 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 LAMA3Q16787 3333 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 LEUTXA8MZ59 168 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 E9PAM4 449 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 PAGE1O75459 146 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 ITGA2P17301 1181 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 SSTR2P30874 369 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 HOXA11P31270 313 aaPredicted RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 DAOAP59103 153 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 MRPL28Q13084 256 aaKnown RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 ZNF621Q6ZSS3 439 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 PAQR9Q6ZVX9 377 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 FBXL6Q8N531 539 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 POF1BQ8WVV4 589 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 FUBP1Q96AE4 644 aaKnown RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 AGO3Q9H9G7 860 aaKnown RBP12.46□□□□□ -0.41
HERC6-202ENST00000273960 GALNT9Q9HCQ5 603 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 GTF2IRD1Q9UHL9 959 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 PCTPQ9UKL6 214 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
HERC6-202ENST00000273960 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 VPS4BO75351 444 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 PRLP01236 227 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 HK3P52790 923 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 TIAL1Q01085 375 aaKnown RBP eCLIP12.46□□□□□ -0.42
HERC6-202ENST00000273960 CPSF6Q16630 551 aaKnown RBP eCLIP12.46□□□□□ -0.42
HERC6-202ENST00000273960 KIAA0319Q5VV43 1072 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.42
HERC6-202ENST00000273960 GALNT11Q8NCW6 608 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms