RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FIGNL2A6NMB9 653 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ARHGEF33A8MVX0 844 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 TARM1B6A8C7 271 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 GOLGA8KD6RF30 607 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 GOLGA8TH3BQL2 631 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 CD3EAPO15446 510 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 P2RX6O15547 441 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 FOXS1O43638 330 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 NIPSNAP2O75323 286 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ZNF189O75820 626 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 MATN4O95460 622 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 HPP00738 406 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 STSP08842 583 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 CD63P08962 238 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 EDN3P14138 238 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 POU3F2P20265 443 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 STIP1P31948 543 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 KCNK10P57789 538 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 SESN2P58004 480 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 PRAMEP78395 509 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 MFAP5Q13361 173 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 SNX1Q13596 522 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ZRSR2Q15696 482 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 RBBP7Q16576 425 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 SYT16Q17RD7 645 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 TCTE1Q5JU00 501 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 YOD1Q5VVQ6 348 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 B3GNTL1Q67FW5 361 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 CNSTQ6PJW8 725 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 PPP1R21Q6ZMI0 780 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 VASH1Q7L8A9 365 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 NLRP9Q7RTR0 991 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 PAQR7Q86WK9 346 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 UBL4BQ8N7F7 174 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 GIMAP7Q8NHV1 300 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 BRIX1Q8TDN6 353 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 TM9SF4Q92544 642 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 PEX13Q92968 403 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ZUFSPQ96AP4 578 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 SLC22A18Q96BI1 424 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 ALS2CR12Q96Q35 445 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 CRB3Q9BUF7 120 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 MRM3Q9HC36 420 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 SEMA3GQ9NS98 782 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 SYBUQ9NX95 663 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 IL1RAPL1Q9NZN1 696 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 ZC3H7BQ9UGR2 993 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 TTC7AQ9ULT0 858 aaPredicted RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 ANKRD17O75179 2603 aaKnown RBP8.52□□□□□ -1.05
TPM3-201ENST00000271850 IGHV1-45A0A0A0MS14 117 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 H0YGG7 62 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 F10P00742 488 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 APOA4P06727 396 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 APRTP07741 180 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 PRR35P0CG20 571 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 MST1P26927 711 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TNFRSF8P28908 595 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 CETN2P41208 172 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TNFSF10P50591 281 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ARF3P61204 181 aaPredicted RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 EEF1A2Q05639 463 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 CDC16Q13042 620 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 KCNJ11Q14654 390 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 PCOLCEQ15113 449 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TLR1Q15399 786 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TYSND1Q2T9J0 566 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ACSBG2Q5FVE4 666 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ZC3H12BQ5HYM0 836 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 PCID2Q5JVF3 399 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 XP32Q5T750 250 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ZNF425Q6IV72 752 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 RPUSD3Q6P087 351 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 SUSD1Q6UWL2 747 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ISLR2Q6UXK2 745 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 PRSS41Q7RTY9 318 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 KIAA1328Q86T90 577 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 FJX1Q86VR8 437 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ZC3H7AQ8IWR0 971 aaKnown RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 LRRC56Q8IYG6 542 aaPredicted RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 CCDC116Q8IYX3 515 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.051e-7■□□□□ 11.2
TPM3-201ENST00000271850 MPP5Q8N3R9 675 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 SIRT6Q8N6T7 355 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 TTC29Q8NA56 475 aaPredicted RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 RAD51AP1Q96B01 352 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 LRRC45Q96CN5 670 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 OR2A5Q96R48 311 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 BAG1Q99933 345 aaPredicted RBP8.51□□□□□ -1.05
TPM3-201ENST00000271850 PLCD4Q9BRC7 762 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 DPH7Q9BTV6 452 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 KIFC1Q9BW19 673 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 ACAT2Q9BWD1 397 aa8.51□□□□□ -1.05
TPM3-201ENST00000271850 UNKQ9C0B0 810 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms