RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 CACNG1Q06432 222 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 SOWAHCQ53LP3 525 aaPredicted RBP16.65■□□□□ 0.26
SRF-201ENST00000265354 SNAP47Q5SQN1 464 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 TTC9BQ8N6N2 239 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 BTN2A2Q8WVV5 523 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 KPNA3O00505 521 aaPredicted RBP16.65■□□□□ 0.26
SRF-201ENST00000265354 ACSL4O60488 711 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 ALPLP05186 524 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 NFE2L1Q14494 772 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 PTCHD3Q3KNS1 767 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 PELI3Q8N2H9 469 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 C2orf49Q9BVC5 232 aaPredicted RBP16.65■□□□□ 0.26
SRF-201ENST00000265354 BOCQ9BWV1 1114 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 ATP13A3Q9H7F0 1226 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 TPT1P8Q9HAU6 139 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 TLR6Q9Y2C9 796 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 HSPB11Q9Y547 144 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
SRF-201ENST00000265354 FPR1P21462 350 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 FDXRP22570 491 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 PTSQ03393 145 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 KANK2Q63ZY3 851 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 GLB1L3Q8NCI6 653 aaPredicted RBP16.65■□□□□ 0.26
SRF-201ENST00000265354 ZNF675Q8TD23 568 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 DUSP26Q9BV47 211 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 NLNQ9BYT8 704 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 TREX1Q9NSU2 369 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 MS4A12Q9NXJ0 267 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 PCDHGB3Q9Y5G1 929 aa16.65■□□□□ 0.26
SRF-201ENST00000265354 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 C12orf71A8MTZ7 269 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 GADD45GO95257 159 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CATP04040 527 aaKnown RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 FOSL2P15408 326 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 GGT1P19440 569 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 SCAPQ12770 1279 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 SNAPC1Q16533 368 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 RNF175Q8N4F7 328 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 HJURPQ8NCD3 748 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 POF1BQ8WVV4 589 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 ARMC5Q96C12 935 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 FEVQ99581 238 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 SMOC2Q9H3U7 446 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 INTS6Q9UL03 887 aaKnown RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 I6L893 689 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 FHP07954 510 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CCNYL3P0C7X3 344 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 AKR1A1P14550 325 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 MAPK12P53778 367 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 RASSF6Q6ZTQ3 369 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 PPCDCQ96CD2 204 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CCDC177Q9NQR7 707 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 DNAJC11Q9NVH1 559 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 ENPP5Q9UJA9 477 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 SPIN1Q9Y657 262 aaPredicted RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CHRNA6Q15825 494 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 CLECL1Q8IZS7 167 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 L3HYPDHQ96EM0 354 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 TMEM169Q96HH4 297 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 STARD7Q9NQZ5 370 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 MRPL39Q9NYK5 338 aaKnown RBP16.64■□□□□ 0.25
SRF-201ENST00000265354 GJD2Q9UKL4 321 aa16.64■□□□□ 0.25
SRF-201ENST00000265354 FAM47E-STBD1D6RA91 191 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 HAS3O00219 553 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 CDRT1O95170 752 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 CCNDBP1O95273 360 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 IGSF6O95976 241 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 NR2F1P10589 423 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 PAICSP22234 425 aaKnown RBP16.63■□□□□ 0.25
SRF-201ENST00000265354 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 PM20D1Q6GTS8 502 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 MZT2BQ6NZ67 158 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 SLC38A4Q969I6 547 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 SLC30A2Q9BRI3 323 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 RHNO1Q9BSD3 238 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 KCNE2Q9Y6J6 123 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 CTDSP2O14595 271 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 LDB2O43679 373 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 TLL1O43897 1013 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 TGFB1P01137 390 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 NPRL3Q12980 569 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ACOX1Q15067 660 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 ERAP2Q6P179 960 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 MSANTD3Q96H12 275 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 BRD7Q9NPI1 651 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
SRF-201ENST00000265354 FADS2P1A8MWK0 482 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 MANBAO00462 879 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 KIAA0513O60268 411 aa16.63■□□□□ 0.25
SRF-201ENST00000265354 CLDN11O75508 207 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms