RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 DNAJB9Q9UBS3 223 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 TBX21Q9UL17 535 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 RUVBL1Q9Y265 456 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 HS3ST2Q9Y278 367 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 ZNF638Q14966 1978 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 CD160O95971 181 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 C7P10643 843 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 DBTP11182 482 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 ZNF182P17025 639 aaPredicted RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 ZNF26P17031 533 aaPredicted RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 PRPS1L1P21108 318 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 CAPN13Q6MZZ7 669 aaPredicted RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 DPP10Q8N608 796 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SUSD6Q92537 303 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SPATA2Q9UM82 520 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SAMD4AQ9UPU9 718 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 BTBD3Q9Y2F9 522 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SNX8Q9Y5X2 465 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 ASMTP46597 345 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 DAG1Q14118 895 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 GRM2Q14416 872 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 FAM219BQ5XKK7 198 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 SLCO6A1Q86UG4 719 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 GPR156Q8NFN8 814 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 EBPLQ9BY08 206 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 ZBP1Q9H171 429 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 HPS4Q9NQG7 708 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 THG1LQ9NWX6 298 aaKnown RBP15.83■□□□□ 0.13
CTCF-201ENST00000264010 SCN3BQ9NY72 215 aa15.83■□□□□ 0.13
CTCF-201ENST00000264010 FPGTO14772 594 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 WNT9AO14904 365 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 PDYNP01213 254 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 ELP6Q0PNE2 266 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 ZFP69Q49AA0 526 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 HCFC1R1Q9NWW0 138 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 SAGE1Q9NXZ1 904 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 DEC1Q9P2X7 70 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 ASB1Q9Y576 335 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 PCDHGA11Q9Y5H2 935 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 SNTNA6NMZ2 147 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 H0Y858 1186 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 RSL1D1O76021 490 aaKnown RBP15.83■□□□□ 0.12
CTCF-201ENST00000264010 ARHGEF15O94989 841 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 RASAL1O95294 804 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 PRKACBP22694 351 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 SOAT1P35610 550 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 HNF4AP41235 474 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 RAB14P61106 215 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 ABATP80404 500 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 TXNL4AP83876 142 aaKnown RBP15.83■□□□□ 0.12
CTCF-201ENST00000264010 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 HDDC2Q7Z4H3 204 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 UBE2J2Q8N2K1 259 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 KRTCAP2Q8N6L1 136 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 TEX37Q96LM6 180 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 C19orf43Q9BQ61 176 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 FARSBQ9NSD9 589 aaKnown RBP15.83■□□□□ 0.12
CTCF-201ENST00000264010 MKL2Q9ULH7 1088 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 CLEC4EQ9ULY5 219 aa15.83■□□□□ 0.12
CTCF-201ENST00000264010 ABCB1P08183 1280 aaPredicted RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 ZNF12P17014 697 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CCR7P32248 378 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TUBA1BP68363 451 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 MYBPC1Q00872 1141 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 RFX4Q33E94 735 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CPTPQ5TA50 214 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ANXA8L1Q5VT79 327 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ERICH5Q6P6B1 374 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TUBA1AQ71U36 451 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 PAGE2Q7Z2X7 111 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ATG16L2Q8NAA4 619 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 DUS3LQ96G46 650 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 RBM4BQ9BQ04 359 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 RBM4Q9BWF3 364 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 AGPAT4Q9NRZ5 378 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 ADPRHL2Q9NX46 363 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 VPS29Q9UBQ0 182 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 FAM32AQ9Y421 112 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 TBC1D3BA6NDS4 549 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 RFPL2O75678 378 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 PPIBP23284 216 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 ETV3P41162 512 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TUBA4AP68366 448 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 IL5RAQ01344 420 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 C16orf62Q7Z3J2 963 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SVOPLQ8N434 492 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 CXorf40AQ8TE69 158 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 POF1BQ8WVV4 589 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SMG7Q92540 1137 aaKnown RBP15.82■□□□□ 0.12
CTCF-201ENST00000264010 TMBIM1Q969X1 311 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 TMIGD2Q96BF3 282 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SLC2A11Q9BYW1 496 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SLAMF8Q9P0V8 285 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 FUOMA2VDF0 154 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 C7orf72A4D263 438 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 SGTAO43765 313 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 OXTRP30559 389 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 WDR45BQ5MNZ6 344 aa15.82■□□□□ 0.12
CTCF-201ENST00000264010 IRAK1BP1Q5VVH5 260 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms