RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CABS1Q96KC9 395 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 FCRL4Q96PJ5 515 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 DPH7Q9BTV6 452 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 SGPP1Q9BX95 441 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 POLR1BQ9H9Y6 1135 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 MRPS30Q9NP92 439 aaKnown RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 NUDT4Q9NZJ9 180 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 LRRC14BA6NHZ5 514 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 BRINP1O60477 761 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 WDR47O94967 919 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 S100BP04271 92 aaPredicted RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 CTSBP07858 339 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 KRT4P19013 534 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 SHC2P98077 582 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 TSNAXIP1Q2TAA8 658 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 CAPN13Q6MZZ7 669 aaPredicted RBP17.63■□□□□ 0.41
SDF4-201ENST00000263741 TRABD2AQ86V40 505 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 D2HGDHQ8N465 521 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 RHEBL1Q8TAI7 183 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 MDM1Q8TC05 714 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 ATL1Q8WXF7 558 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 TMEM109Q9BVC6 243 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 SLC22A14Q9Y267 594 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 BTRCQ9Y297 605 aa17.63■□□□□ 0.41
SDF4-201ENST00000263741 ACACAQ13085 2346 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 SBK3P0C264 359 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 COL6A2P12110 1019 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 CMPK1P30085 196 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 EIF3IQ13347 325 aaKnown RBP17.62■□□□□ 0.41
SDF4-201ENST00000263741 TUBB3Q13509 450 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 PFKFB4Q16877 469 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 FIGLAQ6QHK4 219 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 ADCK2Q7Z695 626 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 THOC6Q86W42 341 aaKnown RBP17.62■□□□□ 0.41
SDF4-201ENST00000263741 ACMSDQ8TDX5 336 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 SLC39A1Q9NY26 324 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 CTSVO60911 334 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 GFAPP14136 432 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 CREB1P16220 341 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 SLC6A12P48065 614 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 SEC24CP53992 1094 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 PRDX1Q06830 199 aaKnown RBP17.62■□□□□ 0.41
SDF4-201ENST00000263741 PLD3Q8IV08 490 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 USP7Q93009 1102 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 NXPE2Q96DL1 559 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 NRSN2Q9GZP1 204 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 SYNPO2LQ9H987 977 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 PDE7BQ9NP56 450 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 FGF21Q9NSA1 209 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 FOXJ2Q9P0K8 574 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 EMCNQ9ULC0 261 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 B3GALT1Q9Y5Z6 326 aa17.62■□□□□ 0.41
SDF4-201ENST00000263741 CDH1P12830 882 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 NPPBP16860 134 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 HNMTP50135 292 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 CYP4F3Q08477 520 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 SULT1C3Q6IMI6 304 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 CCDC121Q6ZUS5 278 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 KMT5CQ86Y97 462 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 TMEM151AQ8N4L1 468 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 GATA6Q92908 595 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 NEIL2Q969S2 332 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 TLCD1Q96CP7 247 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 ACTR5Q9H9F9 607 aaPredicted RBP17.61■□□□□ 0.41
SDF4-201ENST00000263741 ACSS2Q9NR19 701 aa17.61■□□□□ 0.41
SDF4-201ENST00000263741 PTBP2Q9UKA9 531 aaKnown RBP17.61■□□□□ 0.41
SDF4-201ENST00000263741 SYCE1LA8MT33 242 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 C9orf172C9J069 976 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 H7BY64 318 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 SIX3O95343 332 aaPredicted RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 TIAF1O95411 115 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 MEF2AQ02078 507 aaPredicted RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 PRAMEF17Q5VTA0 474 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 CNPY4Q8N129 248 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 CARFQ8N187 725 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 PTGR2Q8N8N7 351 aaPredicted RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 PHF21BQ96EK2 531 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 PGM2Q96G03 612 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 PRAP1Q96NZ9 151 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 MRPL46Q9H2W6 279 aaKnown RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 ASCL3Q9NQ33 180 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 CAPN7Q9Y6W3 813 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 DMXL2Q8TDJ6 3036 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 C1QTNF9BB2RNN3 333 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 TMEM150CB9EJG8 249 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 CCNT2O60583 730 aaKnown RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 SPAG7O75391 227 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 RBP1P09455 135 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 C1QTNF9P0C862 333 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 MC2RQ01718 297 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 RTP5Q14D33 572 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 CATSPEREQ5SY80 951 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 LCTLQ6UWM7 567 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 C17orf64Q86WR6 236 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms