RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 PGRP06401 933 aa16.42■□□□□ 0.22
CROCCP3-201ENST00000263511 HLA-EP13747 358 aa16.42■□□□□ 0.22
CROCCP3-201ENST00000263511 MC1RQ01726 317 aa16.42■□□□□ 0.22
CROCCP3-201ENST00000263511 MGME1Q9BQP7 344 aa16.42■□□□□ 0.22
CROCCP3-201ENST00000263511 HSD3B7Q9H2F3 369 aa16.42■□□□□ 0.22
CROCCP3-201ENST00000263511 A0A075B6Q4 140 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CDH1P12830 882 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 TSPAN5P62079 268 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 OGDHQ02218 1023 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CBX3Q13185 183 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 IQCCQ4KMZ1 466 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 QSOX2Q6ZRP7 698 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 FCGR1BQ92637 280 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CGREF1Q99674 301 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GPR22Q99680 433 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 TMEM98Q9Y2Y6 226 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 PCDHGB5Q9Y5G0 923 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 A8MU76 341 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CXorf49A8MYA2 514 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CPNE3O75131 537 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GATMP50440 423 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 ADGRE1Q14246 886 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CRTC2Q53ET0 693 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 ZNF572Q7Z3I7 529 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 PIM3Q86V86 326 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 OR5AK3PQ8NH89 298 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GEMIN6Q8WXD5 167 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 FANCFQ9NPI8 374 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 IFT46Q9NQC8 304 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 PEX16Q9Y5Y5 336 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 MANBAO00462 879 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 NOBOXO60393 691 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GSTM3P21266 225 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 PTCHD3Q3KNS1 767 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 TMEM198Q66K66 360 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 P4HA3Q7Z4N8 544 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 IQCF2Q8IXL9 164 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GRHL3Q8TE85 626 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 RELTQ969Z4 430 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 ZNF641Q96N77 438 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 EURLQ9NYK6 297 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 C19orf25Q9UFG5 118 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 LCHNA4D1U4 455 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 LOC730098B7Z3J9 87 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 DLX3O60479 287 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 EPOP01588 193 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 DUOXA1Q1HG43 343 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 UAP1L1Q3KQV9 507 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 GOLGA7Q7Z5G4 137 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 OR4F6Q8NGB9 312 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 OR4K17Q8NGC6 315 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 LRRC58Q96CX6 371 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 C1orf74Q96LT6 269 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 NR2C1P13056 603 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 ITGA3P26006 1051 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 E2F2Q14209 437 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 PLEKHG6Q3KR16 790 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 LIN52Q52LA3 116 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 CCDC54Q8NEL0 328 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 SETD7Q8WTS6 366 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 NCSTNQ92542 709 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 FAM83CQ9BQN1 747 aa16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 MRM3Q9HC36 420 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-201ENST00000263511 EME2A4GXA9 379 aaPredicted RBP16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 FOXN2P32314 431 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 XKP51811 444 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 MXD1Q05195 221 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 SCN1BQ07699 218 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 DECR1Q16698 335 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 ZNF783Q6ZMS7 281 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 GMLQ99445 158 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 LGR4Q9BXB1 951 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 MARK1Q9P0L2 795 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 SOCS5O75159 536 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 TACSTD2P09758 323 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 EBLN1P0CF75 366 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 SNTA1Q13424 505 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 DSC3Q14574 896 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 DNM1P34Q6PK57 102 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 SERINC5Q86VE9 423 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 OR56A1Q8NGH5 318 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 NOS1APO75052 506 aaPredicted RBP16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 ZNF3P17036 446 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 GALK1P51570 392 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 UPP1Q16831 310 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 RBM20Q5T481 1227 aaKnown RBP16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 TMEM165Q9HC07 324 aa16.4■□□□□ 0.22
CROCCP3-201ENST00000263511 KLRF1Q9NZS2 232 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms