RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CPOXP36551 454 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 RPL38P63173 70 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 YBX1P67809 324 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 MAPRE2Q15555 327 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 C10orf62Q5T681 223 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 TAF8Q7Z7C8 310 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 FAM129CQ86XR2 697 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 REPS1Q96D71 796 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 SPNS1Q9H2V7 528 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 BRF2Q9HAW0 419 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 ASIC5Q9NY37 505 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 NOP53Q9NZM5 478 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 CCDC167Q9P0B6 97 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 XRCC1P18887 633 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 SHMT2P34897 504 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 NXPH1P58417 271 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 MAD2L1Q13257 205 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 KIAA0040Q15053 153 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 RPS6KA2Q15349 733 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 WDR45BQ5MNZ6 344 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 ABCA7Q8IZY2 2146 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 RNF175Q8N4F7 328 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 ABHD11Q8NFV4 315 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 OR2A1Q8NGT9 310 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 TSC22D4Q9Y3Q8 395 aa22.06■■□□□ 1.12
SMARCB1-201ENST00000263121 TECTAO75443 2155 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 TRBV23OR9-2A0A075B6M9 112 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 OR5K4A6NMS3 321 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 SEC22BO75396 215 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 EZRP15311 586 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 C1orf61Q13536 156 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 GLIPR1L2Q4G1C9 344 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 PRRT3Q5FWE3 981 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 IL23RQ5VWK5 629 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 ICE2Q659A1 982 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 ADNP2Q6IQ32 1131 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 ARMCX6Q7L4S7 300 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 HUS1BQ8NHY5 278 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 ZFPM2Q8WW38 1151 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 UTP4Q969X6 686 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 CMTM7Q96FZ5 175 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 MTERF1Q99551 399 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 CADM1Q9BY67 442 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 TWSG1Q9GZX9 223 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC40A1Q9NP59 571 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 TMEM45AQ9NWC5 275 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 CUEDC1Q9NWM3 386 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 OR6C2Q9NZP2 312 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 POLR3HQ9Y535 204 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 PCDHB11Q9Y5F2 797 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 PCM1Q15154 2024 aa22.05■■□□□ 1.12
SMARCB1-201ENST00000263121 KIR2DS5A0A0G2JLQ3 304 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 A0A0G2JNG1 304 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 KIR2DS3K7RE56 304 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 VILLO15195 856 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 LAMTOR5O43504 91 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 SNRPB2P08579 225 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 KRT16P08779 473 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 PCNAP12004 261 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 PEBP1P30086 187 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 NME5P56597 212 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 UBE2IP63279 158 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 PRDX1Q06830 199 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 CUL3Q13618 768 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 KIR2DS5Q14953 304 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 HIST2H2ACQ16777 129 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 HIST2H2AA3Q6FI13 130 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 AMIGO1Q86WK6 493 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 MAML2Q8IZL2 1156 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 OR4K1Q8NGD4 311 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 LCN9Q8WX39 176 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 PATE1Q8WXA2 126 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 JPH3Q8WXH2 748 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 UBE2E3Q969T4 207 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 POT1Q9NUX5 634 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 ZIM2Q9NZV7 527 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 MAGEB17A8MXT2 336 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 GSC2O15499 205 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 G6PDP11413 515 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 MXRA7P84157 204 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 MEF2AQ02078 507 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 DDX39BQ13838 428 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 DNAL1Q4LDG9 190 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 CYP20A1Q6UW02 462 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 LONP2Q86WA8 852 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 NAGSQ8N159 534 aa22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 EIF3LQ9Y262 564 aaKnown RBP22.04■■□□□ 1.12
SMARCB1-201ENST00000263121 CACNA1IQ9P0X4 2223 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 TMEM221A6NGB7 291 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 M0R296 226 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 FOXE1O00358 373 aaPredicted RBP22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 ANKRD28O15084 1053 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 BCAT2O15382 392 aaPredicted RBP22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 ZFP36L2P47974 494 aaKnown RBP22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 CCR8P51685 355 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 REEP5Q00765 189 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 TRIM48Q8IWZ4 208 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 PARP9Q8IXQ6 854 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 KRT78Q8N1N4 520 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 ZNF740Q8NDX6 193 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms