RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 P2RX2Q9UBL9 471 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 WASH4PA8MWX3 477 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 RFXAPO00287 272 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 AKAP8O43823 692 aaKnown RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 EDN1P05305 212 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 HBQ1P09105 142 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 ATF6P18850 670 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 IDH3AP50213 366 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ACSBG2Q5FVE4 666 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 REP15Q6BDI9 236 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 UNC5DQ6UXZ4 953 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 PTCHD4Q6ZW05 846 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 RHBDD1Q8TEB9 315 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 HHATLQ9HCP6 504 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 MKL2Q9ULH7 1088 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 NUMBLQ9Y6R0 609 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 G3V2T6 193 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 H0YGN5 161 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 AGPSO00116 658 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 EIF3FO00303 357 aaPredicted RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 VSX2P58304 361 aaPredicted RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 HHEXQ03014 270 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 SIM2Q14190 667 aaPredicted RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 ZNF311Q5JNZ3 666 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 CBARPQ8N350 705 aaPredicted RBP13.53□□□□□ -0.24
CDH1-201ENST00000261769 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 BPIFB6Q8NFQ5 453 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ARMC5Q96C12 935 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 ANKRD36CQ5JPF3 1778 aa13.53□□□□□ -0.24
CDH1-201ENST00000261769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 SCDO00767 359 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 GPIP06744 558 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 C1GALT1C1LP0DN25 315 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 SLC10A2Q12908 348 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 LIPJQ5W064 366 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 RPTNQ6XPR3 784 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 GPR149Q86SP6 731 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 CACTIN-AS1Q8N1I8 211 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 OR10A6Q8NH74 314 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 ZFRQ96KR1 1074 aaKnown RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 CPEB1Q9BZB8 566 aaKnown RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 OR51B5Q9H339 312 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 PREBQ9HCU5 417 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 MKKSQ9NPJ1 570 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 ARL8BQ9NVJ2 186 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 MARCH5Q9NX47 278 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 IFT80Q9P2H3 777 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 OR2B3O76000 313 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 CHRNGP07510 517 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 EFNA1P20827 205 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 TMED10P49755 219 aaKnown RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 SLC18A1P54219 525 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 LPAL2Q16609 132 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 ABRAXAS1Q6UWZ7 409 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 P4HA3Q7Z4N8 544 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 NPWQ8N729 165 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 FAM174AQ8TBP5 190 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 PTGFRNQ9P2B2 879 aa13.52□□□□□ -0.24
CDH1-201ENST00000261769 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.24
CDH1-201ENST00000261769 EFCAB10A6NFE3 127 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ELOA3DA6NLF2 546 aaPredicted RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 CAPN5O15484 640 aaPredicted RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 LDB2O43679 373 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ASGR2P07307 311 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 LRP8Q14114 963 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ELOA3BQ3SY89 546 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 LHX8Q68G74 356 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 USP53Q70EK8 1073 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 CAND1Q86VP6 1230 aaKnown RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 SFRP1Q8N474 314 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ELOA3Q8NG57 546 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 ELL3Q9HB65 397 aaPredicted RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 KLRF1Q9NZS2 232 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 PRODH2Q9UF12 536 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 TRIM24O15164 1050 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 BPIP17213 487 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 TTKP33981 857 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 GPX6P59796 221 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 RPS13P62277 151 aaKnown RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 NEDD8Q15843 81 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
CDH1-201ENST00000261769 C19orf18Q8NEA5 215 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 PTGES2Q9H7Z7 377 aa13.52□□□□□ -0.25
CDH1-201ENST00000261769 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms