RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 EPCAMP16422 314 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 FKBP2P26885 142 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A4P31645 630 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 EIF2DP41214 584 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HTR3AP46098 478 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 IDH2P48735 452 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 GPR143P51810 404 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 CTBP1Q13363 440 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KIAA0319Q5VV43 1072 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ANKRD22Q5VYY1 191 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL36Q8N4N3 616 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 HORMAD2Q8N7B1 307 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PSMG2Q969U7 264 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 STRA6Q9BX79 667 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 PREBQ9HCU5 417 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 EXOSC1Q9Y3B2 195 aaKnown RBP4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ATAD5Q96QE3 1844 aa4.21□□□□□ -1.74
VPS13C-202ENST00000261517 ZNFX1Q9P2E3 1918 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 H0Y858 1186 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NOBOXO60393 691 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NME6O75414 186 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PABPC4LP0CB38 370 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PET100P0DJ07 73 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ACTA2P62736 377 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ACTG2P63267 376 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FNBP1LQ5T0N5 605 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF57Q68EA5 555 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FRMD7Q6ZUT3 714 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM145Q8NBT3 493 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MAPK15Q8TD08 544 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TFAP2BQ92481 460 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 APOLD1Q96LR9 279 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DUSP23Q9BVJ7 150 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ASPNQ9BXN1 380 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZBTB26Q9HCK0 441 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NUFIP1Q9UHK0 495 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PNMA8BQ9ULN7 279 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TSC22D4Q9Y3Q8 395 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SHROOM3Q8TF72 1996 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 EPHB6O15197 1021 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 IFNA6P05013 189 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 UBL4AP11441 157 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CPN2P22792 545 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MLLT3P42568 568 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MAPK14Q16539 360 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL17Q6TDP4 642 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CYP2U1Q7Z449 544 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZSWIM9Q86XI8 627 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR2AJ1Q8NGZ0 328 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ADAMTS16Q8TE57 1224 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KBTBD7Q8WVZ9 684 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MPP4Q96JB8 637 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 P2RY13Q9BPV8 354 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 EPHX3Q9H6B9 360 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 COG5Q9UP83 839 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FAM155AB1AL88 458 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CCL16O15467 120 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PCDH7O60245 1069 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HCN1O60741 890 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KHDRBS3O75525 346 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 RGS20O76081 388 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CBX6O95503 412 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SHBGP04278 402 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 THEGLP0DJG4 465 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 RORCP51449 518 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SELENOVP59797 346 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CLCA4Q14CN2 919 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ERN2Q76MJ5 926 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TRIB2Q92519 343 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 LPGAT1Q92604 370 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DAZLQ92904 295 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR2M4Q96R27 311 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PRRG4Q9BZD6 226 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MTMR11A4FU01 709 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SNPHO15079 494 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 AP5Z1O43299 807 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PRKYO43930 277 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM127O75204 238 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SASH3O75995 380 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CST3P01034 146 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SAGP10523 405 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF823P16415 610 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SLC25A25Q6KCM7 469 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GPR156Q8NFN8 814 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR5P2Q8WZ92 322 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SIPA1Q96FS4 1042 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NODALQ96S42 347 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ACTR6Q9GZN1 396 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MEAF6Q9HAF1 191 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PDE7BQ9NP56 450 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NANSQ9NR45 359 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ABCB8Q9NUT2 735 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FOXE1O00358 373 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MMP20O60882 483 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KAT7O95251 611 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 H6PDO95479 791 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DSTNP60981 165 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PLA2G4EQ3MJ16 856 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PAOXQ6QHF9 649 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GDPGP1Q6ZNW5 385 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms