RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 HPRP00739 348 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 F11P03951 625 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ANXA5P08758 320 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 LAMP1P11279 417 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CRATP43155 626 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 FCGRTP55899 365 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SLC35A2P78381 396 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 DMPKQ09013 629 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CRHR2Q13324 411 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 HKDC1Q2TB90 917 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 IER5LQ5T953 404 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CXorf57Q6NSI4 855 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CYP2U1Q7Z449 544 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 C2orf73Q8N5S3 287 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 DMRTB1Q96MA1 342 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 COPS8Q99627 209 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 RMND5AQ9H871 391 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 LRFN2Q9ULH4 789 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 MYOFQ9NZM1 2061 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 FAM227AF5H4B4 570 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 GABARAPO95166 117 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 HOXC8P31273 242 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CHIT1Q13231 466 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 MED22Q15528 200 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ZXDCQ2QGD7 858 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SETD9Q8NE22 299 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 C1QTNF3Q9BXJ4 246 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SMG9Q9H0W8 520 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 DDX28Q9NUL7 540 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SCHIP1Q9P0W5 487 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 GNG14A0A1W2PPG7 69 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 J3KTA2 159 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 TFECO14948 347 aaPredicted RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 SLC22A1O15245 554 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 YY2O15391 372 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 EPN2O95208 641 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 NPPAP01160 153 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CKBP12277 381 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 GRK5P34947 590 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 PPP3CCP48454 512 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ALDH7A1P49419 539 aaKnown RBP12.84□□□□□ -0.35
PGBD1-201ENST00000259883 CDH12P55289 794 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 NCEH1Q6PIU2 408 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 HMGN2P46Q86SG4 172 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 DBF4BQ8NFT6 615 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 PJA1Q8NG27 643 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 PEX13Q92968 403 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
PGBD1-201ENST00000259883 COQ9O75208 318 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 IGLV3-27P01718 113 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 SLC10A3P09131 477 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HIST1H2AGP0C0S8 130 aaPredicted RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 PABPC1P11940 636 aaKnown RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HIST1H2ADP20671 130 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HMGCLP35914 325 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 LRRC74AQ0VAA2 488 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 TOP3AQ13472 1001 aaPredicted RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 CAMK2GQ13555 558 aaPredicted RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 TIGD6Q17RP2 521 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 ATP13A5Q4VNC0 1218 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 STEAP3Q658P3 488 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 NEK5Q6P3R8 708 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 ZSWIM9Q86XI8 627 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 OR9Q2Q8NGE9 314 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 DYNC2LI1Q8TCX1 351 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 SCAMP4Q969E2 229 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HIST1H2AHQ96KK5 128 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HIST1H2AJQ99878 128 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 H2AFJQ9BTM1 129 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 OARD1Q9Y530 152 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 NPIPB15A6NHN6 443 aaPredicted RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 UNCXA6NJT0 531 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 TTC34A8MYJ7 566 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 HOXA9P31269 272 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 CCR7P32248 378 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 KDELR2P33947 212 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 IRF8Q02556 426 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 PRKCZQ05513 592 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 DSC1Q08554 894 aa12.83□□□□□ -0.36
PGBD1-201ENST00000259883 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
PGBD1-201ENST00000259883 SELENBP1Q13228 472 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms