RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 AOC1P19801 751 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 GATMP50440 423 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF805Q5CZA5 627 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 TOR1AIP1Q5JTV8 583 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 NIPAL1Q6NVV3 410 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 MEIOBQ8N635 442 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 CLDN19Q8N6F1 224 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 C9orf43Q8TAL5 461 aaPredicted RBP18.47■□□□□ 0.55
PTPRE-201ENST00000254667 TRIB3Q96RU7 358 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 KCNS3Q9BQ31 491 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 CHCHD6Q9BRQ6 235 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 EBF3Q9H4W6 596 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 UTS2RQ9UKP6 389 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 A0A1W2PQ72 361 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 BHMG1C9JSJ3 638 aaPredicted RBP18.47■□□□□ 0.55
PTPRE-201ENST00000254667 REM1O75628 298 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 RGS20O76081 388 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 SERPINA3P01011 423 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 CCT3P49368 545 aaKnown RBP18.47■□□□□ 0.55
PTPRE-201ENST00000254667 NR4A3Q92570 626 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 NDC1Q9BTX1 674 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 SPHK2Q9NRA0 654 aa18.47■□□□□ 0.55
PTPRE-201ENST00000254667 PDCD5O14737 125 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 NOVP48745 357 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 AQP4P55087 323 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 BTN3A2P78410 334 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 TGFBIQ15582 683 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 UBAP2Q5T6F2 1119 aaKnown RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 A0A1W2PP18 115 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 CASRP41180 1078 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ATP4BP51164 291 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 OR10H4Q8NGA5 316 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 NARS2Q96I59 477 aaKnown RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 PRODHO43272 600 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 TPST2O60704 377 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 CYP11A1P05108 521 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ACVR2AP27037 513 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 IL18R1Q13478 541 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 WDR45BQ5MNZ6 344 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 SLC29A4Q7RTT9 530 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 OMA1Q96E52 524 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 YTHDF1Q9BYJ9 559 aaKnown RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 MED31Q9Y3C7 131 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 PCDHGB1Q9Y5G3 927 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 A0A0D9SEW6 157 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 SLC16A5O15375 505 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 RPLP0P05388 317 aaKnown RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ABHD18Q0P651 414 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 SCAPQ12770 1279 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 KLF1Q13351 362 aaPredicted RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ZNF630Q2M218 657 aaPredicted RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 CRB2Q5IJ48 1285 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 ADNP2Q6IQ32 1131 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 SMARCD3Q6STE5 483 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 C15orf39Q6ZRI6 1047 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 LRRC15Q8TF66 581 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 PCDHAC1Q9H158 963 aa18.46■□□□□ 0.55
PTPRE-201ENST00000254667 PNO1Q9NRX1 252 aaKnown RBP18.46■□□□□ 0.55
PTPRE-201ENST00000254667 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 TRIM3O75382 744 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 IQCF3P0C7M6 154 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF865P0CJ78 1059 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ACADLP28330 430 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 CBX5P45973 191 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ACSBG2Q5FVE4 666 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 FRMD7Q6ZUT3 714 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ERN2Q76MJ5 926 aaKnown RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 OR2AJ1Q8NGZ0 328 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 FAM110BQ8TC76 370 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 RANBP9Q96S59 729 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 SFXN1Q9H9B4 322 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 POFUT2Q9Y2G5 429 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 PCDHGA2Q9Y5H1 932 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 RHOP08100 348 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 MERTKQ12866 999 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 C5orf22Q49AR2 442 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 CDH24Q86UP0 819 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 FEM1AQ9BSK4 669 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 OR51V1Q9H2C8 321 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 WASF2Q9Y6W5 498 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 MTHFD1P11586 935 aaKnown RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 GPR153Q6NV75 609 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 RAB2BQ8WUD1 216 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 Q9N2J8 555 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 PGRP06401 933 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 AHCYP23526 432 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 SOX4Q06945 474 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 TMEM115Q12893 351 aaPredicted RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 DSC3Q14574 896 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 RBM48Q5RL73 367 aaKnown RBP18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF678Q5SXM1 525 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 LGI4Q8N135 537 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 EPYCQ99645 322 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 SLC2A11Q9BYW1 496 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 ZBTB26Q9HCK0 441 aa18.45■□□□□ 0.54
PTPRE-201ENST00000254667 CPSF4LA6NMK7 179 aaKnown RBP18.44■□□□□ 0.54
PTPRE-201ENST00000254667 NOBOXO60393 691 aa18.44■□□□□ 0.54
PTPRE-201ENST00000254667 H6PDO95479 791 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms