RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TSPAN17Q96FV3 270 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 CHST8Q9H2A9 424 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 UTP6Q9NYH9 597 aaKnown RBP13.64□□□□□ -0.23
CNN1-201ENST00000252456 ANKMY1Q9P2S6 941 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 RAB21Q9UL25 225 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 PCDHGA6Q9Y5G7 932 aa13.64□□□□□ -0.23
CNN1-201ENST00000252456 A0A0J9YVX5 310 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 GUCA1CO95843 209 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 HIST1H2AGP0C0S8 130 aaPredicted RBP13.63□□□□□ -0.23
CNN1-201ENST00000252456 FAM153BP0C7A2 387 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 MYBL2P10244 700 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 TCN2P20062 427 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 HIST1H2ADP20671 130 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 PHBP35232 272 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 SLC12A2P55011 1212 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 ABATP80404 500 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 DNASE1L3Q13609 305 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 BMPR2Q13873 1038 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 PTCHD3Q3KNS1 767 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 FAM153CQ494X1 144 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 ZC3H12BQ5HYM0 836 aaKnown RBP13.63□□□□□ -0.23
CNN1-201ENST00000252456 PRAMEF13Q5VWM6 474 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 TLDC1Q6P9B6 456 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 OR56A3Q8NH54 315 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 TTC9Q92623 222 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 MR1Q95460 341 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 PTERQ96BW5 349 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 PYCR2Q96C36 320 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 FBXL8Q96CD0 374 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 CLIP3Q96DZ5 547 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 MRRFQ96E11 262 aaKnown RBP13.63□□□□□ -0.23
CNN1-201ENST00000252456 HIST1H2AHQ96KK5 128 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 BBC3Q96PG8 261 aaPredicted RBP13.63□□□□□ -0.23
CNN1-201ENST00000252456 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 OR4K3Q96R72 315 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 HIST1H2AJQ99878 128 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 H2AFJQ9BTM1 129 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 TXLNGYQ9BZA5 131 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 STARD5Q9NSY2 213 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 DHCR7Q9UBM7 475 aaKnown RBP13.63□□□□□ -0.23
CNN1-201ENST00000252456 AP1M2Q9Y6Q5 423 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
CNN1-201ENST00000252456 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 C21orf140B9A014 251 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 NKX2-8O15522 239 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 MED26O95402 600 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 CD1DP15813 335 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 NPPBP16860 134 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 ITGAXP20702 1163 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 DLG1Q12959 904 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 SLMAPQ14BN4 828 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 NAA25Q14CX7 972 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 THEMIS2Q5TEJ8 643 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 ADAMTSL2Q86TH1 951 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 GSPT2Q8IYD1 628 aaKnown RBP13.62□□□□□ -0.23
CNN1-201ENST00000252456 SLC44A1Q8WWI5 657 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 MED8Q96G25 268 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 OR2A5Q96R48 311 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 ZFYVE21Q9BQ24 234 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 SELENOSQ9BQE4 189 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 OARD1Q9Y530 152 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
CNN1-201ENST00000252456 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 H7BY64 318 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 HAT1O14929 419 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 SRPX2O60687 465 aaPredicted RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 ALDOAP04075 364 aaKnown RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 KLK3P07288 261 aaPredicted RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 TUBBP07437 444 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 HBQ1P09105 142 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 EZRP15311 586 aaKnown RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 VSX2P58304 361 aaPredicted RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 RPS18P62269 152 aaKnown RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 CDKL1Q00532 357 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 NFKB2Q00653 900 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 RELAQ04206 551 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 OR4D1Q15615 310 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 ATP1A1-AS1Q5TC04 95 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 LCTLQ6UWM7 567 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 PLD3Q8IV08 490 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 DTWD1Q8N5C7 304 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 PRAP1Q96NZ9 151 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 EFHD1Q9BUP0 239 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 TRIM54Q9BYV2 358 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 PCBD2Q9H0N5 130 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 ACTL8Q9H568 366 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 ZNF446Q9NWS9 450 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 SRPK3Q9UPE1 567 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 ZNF891A8MT65 544 aaPredicted RBP13.61□□□□□ -0.23
CNN1-201ENST00000252456 H0YGG7 62 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 FURINP09958 794 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 CCND1P24385 295 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 KCNC1P48547 511 aa13.61□□□□□ -0.23
CNN1-201ENST00000252456 ARF3P61204 181 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms