RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RTL10Q7L3V2 364 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 GALNT13Q8IUC8 556 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 NPAS3Q8IXF0 933 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 CADM3Q8N126 398 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 CYB5D2Q8WUJ1 264 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 GDF15Q99988 308 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 INVSQ9Y283 1065 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 CCL27Q9Y4X3 112 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 COMMD10Q9Y6G5 202 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 GPR39O43194 453 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 ALDH4A1P30038 563 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 RAPSNQ13702 412 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 DGUOKQ16854 277 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 GTDC1Q4AE62 458 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 RUNDC3AQ59EK9 446 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 HIPK1Q86Z02 1210 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 FGF13Q92913 245 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 GLMNQ92990 594 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 DPY30Q9C005 99 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 MTG2Q9H4K7 406 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 NECTIN3Q9NQS3 549 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 FBXO8Q9NRD0 319 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 ERVK-18Q9QC07 812 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 DPP7Q9UHL4 492 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 FAM32AQ9Y421 112 aaKnown RBP16.5■□□□□ 0.23
FOXA1-201ENST00000250448 ANKRD66B4E2M5 251 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 KDM1AO60341 852 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 CREG1O75629 220 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 PABPC1P11940 636 aaKnown RBP16.5■□□□□ 0.23
FOXA1-201ENST00000250448 BMP4P12644 408 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 SERPINB10P48595 397 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 VAC14Q08AM6 782 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 INAQ16352 499 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 AGAP7PQ5VUJ5 663 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 ADAMTSL2Q86TH1 951 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 YIPF6Q96EC8 236 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 IPPKQ9H8X2 491 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 ZMYM5Q9UJ78 669 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 U3KQV3 271 aa16.5■□□□□ 0.23
FOXA1-201ENST00000250448 OTOL1A6NHN0 477 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-201ENST00000250448 IQCF5A8MTL0 148 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 FAM220BPB1ANY3 271 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 TGM1P22735 817 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 HOXD12P35452 270 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 LRRC73Q5JTD7 316 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 ADCK1Q86TW2 530 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 C12orf40Q86WS4 652 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 ZNF366Q8N895 744 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
FOXA1-201ENST00000250448 FBXO10Q9UK96 956 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 AP3M1Q9Y2T2 418 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-201ENST00000250448 M0QX08 132 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 RGS14O43566 566 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 SERPINA1P01009 418 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 FTH1P02794 183 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 ESR1P03372 595 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 PGRP06401 933 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 FMO3P31513 532 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 MAP2K4P45985 399 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 CLCN7P51798 805 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 LSM3P62310 102 aaKnown RBP16.49■□□□□ 0.23
FOXA1-201ENST00000250448 KCNC3Q14003 757 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 TMEM53Q6P2H8 277 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 SBSNQ6UWP8 590 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 GCNT7Q6ZNI0 430 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 LIX1Q8N485 282 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 GLB1L3Q8NCI6 653 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-201ENST00000250448 SETD9Q8NE22 299 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 ERLEC1Q96DZ1 483 aa16.49■□□□□ 0.23
FOXA1-201ENST00000250448 PRMT5O14744 637 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 MITFO75030 526 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 IGFBP5P24593 272 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 MAD2L1Q13257 205 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 DHCR24Q15392 516 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 Q6ZVU0 165 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 B3GNT8Q7Z7M8 397 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 P2RY8Q86VZ1 359 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ZSWIM9Q86XI8 627 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CHPFQ8IZ52 775 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 OR6Q1Q8NGQ2 317 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 SFXN1Q9H9B4 322 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PCDHGA10Q9Y5H3 936 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PMF1-BGLAPU3KQ54 211 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 TRBV5-3A0A0A0MS03 114 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 STX7O15400 261 aaKnown RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 CYP17A1P05093 508 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 IL6P05231 212 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 FSHRP23945 695 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 ACVR2AP27037 513 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 HOXD11P31277 338 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PTGER3P43115 390 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PIK3CGP48736 1102 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 HSPA7P48741 367 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 PAGE2BQ5JRK9 111 aa16.48■□□□□ 0.23
FOXA1-201ENST00000250448 TMEM236Q5W0B7 351 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms