RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 LRRC4CQ9HCJ2 640 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 TUBD1Q9UJT1 453 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 SNX7Q9UNH6 387 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 POLHQ9Y253 713 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 BSNQ9UPA5 3926 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 DSCR3O14972 297 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 KATNA1O75449 491 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 WISP3O95389 354 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CAPN1P07384 714 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CTSBP07858 339 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CCR10P46092 362 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 EMP3P54852 163 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CDKL1Q00532 357 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 TSTA3Q13630 321 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 IL10RAQ13651 578 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 ZKSCAN8Q15776 578 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 PPP1R3AQ16821 1122 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 KBTBD12Q3ZCT8 623 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 AGTRAPQ6RW13 159 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 SPNS2Q8IVW8 549 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 ENDOVQ8N8Q3 282 aaKnown RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 THAP4Q8WY91 577 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 FKBP10Q96AY3 582 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 SGPP1Q9BX95 441 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 SPRTNQ9H040 489 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 AKIRIN1Q9H9L7 192 aaPredicted RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 ARL15Q9NXU5 204 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 TCFL5Q9UL49 500 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 FARSAQ9Y285 508 aaKnown RBP12.23□□□□□ -0.45
VPREB3-201ENST00000248948 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 CCDC88CQ9P219 2028 aa12.23□□□□□ -0.45
VPREB3-201ENST00000248948 NRP2O60462 931 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 ONECUT2O95948 504 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 STMN1P16949 149 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 SAT1P21673 171 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 PHBP35232 272 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 POLE2P56282 527 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 YBX1P67809 324 aaKnown RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 DCDP81605 110 aaKnown RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 ZNF460Q14592 562 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 FAM214AQ32MH5 1076 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 NKAIN1Q4KMZ8 207 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 GRTP1Q5TC63 336 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 CAPN13Q6MZZ7 669 aaPredicted RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 C16orf46Q6P387 395 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 LCTLQ6UWM7 567 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 TMEM207Q6UWW9 146 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 CEP97Q8IW35 865 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 APOBEC4Q8WW27 367 aaKnown RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 FBXL8Q96CD0 374 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 MVB12AQ96EY5 273 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 RUFY1Q96T51 708 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 FMO2Q99518 471 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 CUTCQ9NTM9 273 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 DHCR7Q9UBM7 475 aaKnown RBP12.22□□□□□ -0.45
VPREB3-201ENST00000248948 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 OARD1Q9Y530 152 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 SPTA1P02549 2419 aa12.22□□□□□ -0.45
VPREB3-201ENST00000248948 A0A0J9YVX5 310 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 CDC14CA4D256 554 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 NPEPPSL1A6NEC2 478 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 TXNDC9O14530 226 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 C1QL1O75973 258 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 FAM87AP0C7U9 286 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 HNMTP50135 292 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PGGT1BP53609 377 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PMS2P54278 862 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 VSX2P58304 361 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 LY6DQ14210 128 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 ERV3-1Q14264 604 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PRTGQ2VWP7 1150 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 C1orf189Q5VU69 101 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 LCN10Q6JVE6 187 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PRMT9Q6P2P2 845 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 ADCK2Q7Z695 626 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 C17orf64Q86WR6 236 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 CSNK1A1LQ8N752 337 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 PPM1NQ8N819 430 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 OR56A3Q8NH54 315 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 ADAMTS17Q8TE56 1095 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 FBF1Q8TES7 1133 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms