RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 USP22Q9UPT9 525 aa22.57■■□□□ 1.2
SYNGR3-201ENST00000248121 PCM1Q15154 2024 aa22.57■■□□□ 1.2
SYNGR3-201ENST00000248121 H0YIV9 168 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 MYCLP1P12525 358 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SDC1P18827 310 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 CCR3P51677 355 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PLIN5Q00G26 463 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 LIPEQ05469 1076 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SELPLGQ14242 412 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SPATS1Q496A3 300 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 AMZ2Q86W34 360 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PDSS2Q86YH6 399 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SYTL1Q8IYJ3 562 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 TMEM102Q8N9M5 508 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 GTF2H4Q92759 462 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 ZUFSPQ96AP4 578 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PPM1MQ96MI6 270 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 ZBTB18Q99592 522 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 LRCH1Q9Y2L9 728 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PLEKHM1Q9Y4G2 1056 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 NPPBP16860 134 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 CLDN8P56748 225 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PHC1P78364 1004 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 BNIP2Q12982 314 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PWP1Q13610 501 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SLCO4C1Q6ZQN7 724 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 LRRTM4Q86VH4 590 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 TRIM69Q86WT6 500 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 OR2T34Q8NGX1 318 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 FCRL1Q96LA6 429 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 APOLD1Q96LR9 279 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 MTERF1Q99551 399 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 APOOQ9BUR5 198 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SGPP1Q9BX95 441 aa22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 PHPT1Q9NRX4 125 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 SPATA6Q9NWH7 488 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-201ENST00000248121 C19orf67A6NJJ6 358 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 SEMA4FO95754 770 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 PGRP06401 933 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 CEACAM5P06731 702 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 TEAD1P28347 426 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 HNF4AP41235 474 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 GRIA3P42263 894 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 GTF2A1P52655 376 aaPredicted RBP22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 TAP2Q03519 686 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 LRRC32Q14392 662 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 LCN8Q6JVE9 175 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 PDZD3Q86UT5 571 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 OXR1Q8N573 874 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 FAM110BQ8TC76 370 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 EGLN2Q96KS0 407 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 TSSK3Q96PN8 268 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 CGREF1Q99674 301 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 AP4S1Q9Y587 144 aa22.55■■□□□ 1.2
SYNGR3-201ENST00000248121 C10orf142B7Z368 130 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PEX1O43933 1283 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 IL6P05231 212 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 AQP4P55087 323 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 EEFSECP57772 596 aaKnown RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 ZNF33BQ06732 778 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CSTF3Q12996 717 aaKnown RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CAPN13Q6MZZ7 669 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 IFNEQ86WN2 208 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PTRH1Q86Y79 214 aaKnown RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PHC3Q8NDX5 983 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 TSTD1Q8NFU3 115 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 TOE1Q96GM8 510 aaKnown RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 TBC1D17Q9HA65 648 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 GPRC5BQ9NZH0 403 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 VAPAQ9P0L0 249 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 ACTR3BQ9P1U1 418 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PPT2Q9UMR5 302 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 TMED5Q9Y3A6 229 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 KCNE2Q9Y6J6 123 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 LRP4O75096 1905 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 ZNF839A8K0R7 811 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 ARPC2O15144 300 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 ETHE1O95571 254 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CAPNS1P04632 268 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PRPS2P11908 318 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 SLC7A1P30825 629 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CATSPEREQ5SY80 951 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 UNC5DQ6UXZ4 953 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CHST15Q7LFX5 561 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 SPPL2CQ8IUH8 684 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 OR5AR1Q8NGP9 310 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 BMFQ96LC9 184 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 LRGUKQ96M69 825 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 SGK2Q9HBY8 427 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 FGF22Q9HCT0 170 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 CD320Q9NPF0 282 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 MUTYHQ9UIF7 546 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 PNMA8BQ9ULN7 279 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 SLCO1B1Q9Y6L6 691 aa22.54■■□□□ 1.2
SYNGR3-201ENST00000248121 C15orf38-AP3S2A0A0A6YYH1 394 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 DFNA5O60443 496 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 IGHV4-34P06331 123 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 ACPPP15309 386 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 MTPNP58546 118 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 RPA4Q13156 261 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms