RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FCGR1AP12314 374 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TCN1P20061 433 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 EEF1DP29692 281 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC6A4P31645 630 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC11A1P49279 550 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 NR1H2P55055 460 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 MYBPC1Q00872 1141 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF177Q13360 481 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RCAN2Q14206 197 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RAB39AQ14964 217 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RPS6KA2Q15349 733 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 GEN1Q17RS7 908 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PDCD4Q53EL6 469 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SETMARQ53H47 684 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 XKR7Q5GH72 579 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 HECTD3Q5T447 861 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 INTS11Q5TA45 600 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC8B1Q6J4K2 584 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 UGT3A1Q6NUS8 523 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 LRRC8DQ7L1W4 858 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 CARM1Q86X55 608 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 RYBPQ8N488 228 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TP53I13Q8NBR0 393 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 FAM156AQ8NDB6 213 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 OR4K2Q8NGD2 314 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 OR56A4Q8NGH8 313 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 OR9I1Q8NGQ6 314 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 OR14K1Q8NGZ2 314 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TRPC4APQ8TEL6 797 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 DIS3LQ8TF46 1054 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 FUBP1Q96AE4 644 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLCO4A1Q96BD0 722 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TUBGCP3Q96CW5 907 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 MBD6Q96DN6 1003 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 MYEOVQ96EZ4 313 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 PDLIM5Q96HC4 596 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF382Q96SR6 550 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TUBB1Q9H4B7 451 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SEC61A2Q9H9S3 476 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 FBRSL1Q9HCM7 1045 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 SLC52A3Q9NQ40 469 aa7.7□□□□□ -1.18
CXCR4-201ENST00000241393 TRMT6Q9UJA5 497 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 AGO1Q9UL18 857 aaKnown RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ZFP37Q9Y6Q3 630 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-201ENST00000241393 ATP6AP2A0A1C7CYW4 349 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ARHGAP10A1A4S6 786 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ZNF840PA6NDX5 716 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 IFRD1O00458 451 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 NME4O00746 187 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CRCPO75575 148 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ATP6AP2O75787 350 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TSPAN12O95859 305 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 GALTP07902 379 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 UMPSP11172 480 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 HGFP14210 728 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ATF6P18850 670 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TSPAN8P19075 237 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 HDCP19113 662 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CAPN3P20807 821 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 IL10P22301 178 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 SLC6A2P23975 617 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 HOXD10P28358 340 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 FMO4P31512 558 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PTGER3P43115 390 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PPP3CCP48454 512 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ARPP19P56211 112 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 EEFSECP57772 596 aaKnown RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TUBA4AP68366 448 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CDKL1Q00532 357 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 RALGDSQ12967 914 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 BFSP2Q13515 415 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PTPRCAPQ14761 206 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CYTH1Q15438 398 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TSNQ15631 228 aaKnown RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 INO80DQ53TQ3 878 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 C6orf52Q5T4I8 152 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CERS6Q6ZMG9 384 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 GALNT13Q8IUC8 556 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 DDIASQ8IXT1 998 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 SLC15A3Q8IY34 581 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 LRRC56Q8IYG6 542 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CMTM4Q8IZR5 234 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TTC30BQ8N4P2 665 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ANKRD53Q8N9V6 530 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 HM13Q8TCT9 377 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 LRTOMTQ8WZ04 291 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 SEPT8Q92599 483 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 EXT2Q93063 718 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 LRRC58Q96CX6 371 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 RMDN1Q96DB5 314 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 MTFMTQ96DP5 389 aaKnown RBP7.69□□□□□ -1.18
CXCR4-201ENST00000241393 CNBD2Q96M20 576 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 BIRC8Q96P09 236 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 TAAR9Q96RI9 348 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 GPR21Q99679 349 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 ANKRD60Q9BZ19 345 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 NELFAQ9H3P2 528 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 COQ10BQ9H8M1 238 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 PNPLA3Q9NST1 481 aa7.69□□□□□ -1.18
CXCR4-201ENST00000241393 NUDT4Q9NZJ9 180 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms