RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DSC2Q02487 901 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 SCRN2Q96FV2 425 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 EFCAB11Q9BUY7 163 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 FTHL17Q9BXU8 183 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 RIMKLBQ9ULI2 386 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 RENP00797 406 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 AIMP2Q13155 320 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 PCLAFQ15004 111 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 KBTBD6Q86V97 674 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ZNF675Q8TD23 568 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 HERC2P3Q9BVR0 1158 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 DERL2Q9GZP9 239 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ELAC1Q9H777 363 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 NDOR1Q9UHB4 597 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ZDHHC2Q9UIJ5 367 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 OXSR1O95747 527 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 ARL2P36404 184 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 GID4Q8IVV7 300 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 PNLDC1Q8NA58 520 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 ATAD1Q8NBU5 361 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 LRRN4Q8WUT4 740 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 EXOSC8Q96B26 276 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 ASPNQ9BXN1 380 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 EIF1AYO14602 144 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 EEDO75530 441 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 MAP3K8P41279 467 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 RHBDL3P58872 404 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ARL9Q6T311 187 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 CYS1Q717R9 158 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 PSD4Q8NDX1 1056 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 SLC7A6OSQ96CW6 309 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 MEAF6Q9HAF1 191 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 POPDC3Q9HBV1 291 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ARF4P18085 180 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 VAMP2P63027 116 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 HNRNPA0Q13151 305 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 MINDY1Q8N5J2 469 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 AZIN2Q96A70 460 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 CIR1Q86X95 450 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 SGCDQ92629 289 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 NTPCRQ9BSD7 190 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 OR51V1Q9H2C8 321 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 MKKSQ9NPJ1 570 aaPredicted RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 SCNN1GP51170 649 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 UGCGQ16739 394 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 GPRC6AQ5T6X5 926 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 MMAAQ8IVH4 418 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 PEX13Q92968 403 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 B3GNT5Q9BYG0 378 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ADAMTS6Q9UKP5 1117 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 ARHGEF28Q8N1W1 1705 aaKnown RBP8.02□□□□□ -1.13
APOB-201ENST00000233242 TNS2Q63HR2 1409 aa8.02□□□□□ -1.13
APOB-201ENST00000233242 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 TLX3O43711 291 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 HSD17B1P14061 328 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GRK6P43250 576 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CAND1Q86VP6 1230 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 ABHD11Q8NFV4 315 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 SOCS4Q8WXH5 440 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MUS81Q96NY9 551 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 C14orf166Q9Y224 244 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 OR2AG2A6NM03 316 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 LRRTM2O43300 516 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PGAM2P15259 253 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CYBRD1Q53TN4 286 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 FCAMRQ8WWV6 532 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 TMEM203Q969S6 136 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF514Q96K75 400 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 PRKACAP17612 351 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 KIAA1161Q6NSJ0 714 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ABHD15Q6UXT9 468 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 AQP11Q8NBQ7 271 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MTG2Q9H4K7 406 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ACSS2Q9NR19 701 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 FFAR2O15552 330 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ECI2O75521 394 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 DSTNP60981 165 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GK3PQ14409 553 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 ZNF627Q7L945 461 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GALNTL5Q7Z4T8 443 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 OR5T3Q8NGG3 340 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 KIAA1191Q96A73 305 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PGLYRP2Q96PD5 576 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 GON7Q9BXV9 100 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 RSPH9Q9H1X1 276 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 METTL8Q9H825 291 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 NUFIP1Q9UHK0 495 aaKnown RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 TMEM5Q9Y2B1 443 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 CHD1O14646 1710 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 PTPRAP18433 802 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 KCNA5P22460 613 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 IL32P24001 234 aa8.01□□□□□ -1.13
APOB-201ENST00000233242 KLF1Q13351 362 aaPredicted RBP8.01□□□□□ -1.13
APOB-201ENST00000233242 PRSS48Q7RTY5 328 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms