RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 LRCH3Q96II8 777 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 PPIL3Q9H2H8 161 aaKnown RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 ABHD14A-ACY1A0A1B0GW23 586 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 C1RP00736 705 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 LMO2P25791 158 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 RAB2AP61019 212 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 GRB7Q14451 532 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 STEAP4Q687X5 459 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 FBXO42Q6P3S6 717 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 KLHL24Q6TFL4 600 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 HYLS1Q96M11 299 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 FKBP14Q9NWM8 211 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF780BQ9Y6R6 833 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF487B1APH4 448 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 C9IYK1 514 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 CLDN11O75508 207 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 PPP3R1P63098 170 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 RPP38P78345 283 aaKnown RBP13.46□□□□□ -0.26
HCFC2-201ENST00000229330 GRM2Q14416 872 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 KIAA1161Q6NSJ0 714 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 HAGHLQ6PII5 290 aaPredicted RBP13.46□□□□□ -0.26
HCFC2-201ENST00000229330 OXR1Q8N573 874 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 AQP11Q8NBQ7 271 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 FAM46DQ8NEK8 389 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 MAPK15Q8TD08 544 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 ADAMTS15Q8TE58 950 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 RHBGQ9H310 441 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 ALG5Q9Y673 324 aa13.46□□□□□ -0.26
HCFC2-201ENST00000229330 INSIG1O15503 277 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF132P52740 706 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 PLD1Q13393 1074 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 TAF13Q15543 124 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 C4orf46Q504U0 113 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 FRRS1Q6ZNA5 592 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 TPGS1Q6ZTW0 290 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 COQ8AQ8NI60 647 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 DPCDQ9BVM2 203 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 TREM1Q9NP99 234 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 HEMK1Q9Y5R4 338 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 CDC7O00311 574 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 NIPSNAP2O75323 286 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 EEDO75530 441 aaKnown RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 PCDH8O95206 1070 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 SNRPD2P62316 118 aaKnown RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 MAF1Q9H063 256 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 CKLFQ9UBR5 152 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 AXIN1O15169 862 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 TSPAN1O60635 241 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 CASP9P55211 416 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 CAMK1Q14012 370 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 MSANTD2Q6P1R3 559 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 PAMR1Q6UXH9 720 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF285Q96NJ3 590 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 DHRS4Q9BTZ2 278 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 BCO2Q9BYV7 579 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 PCDHGC4Q9Y5F7 938 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 AQP9O43315 295 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 SSR2P43308 183 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 RAB12Q6IQ22 244 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 DUS1LQ6P1R4 473 aaKnown RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 NOXA1Q86UR1 476 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 Q8N402 240 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 KIAA1191Q96A73 305 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 EXOSC8Q96B26 276 aaKnown RBP13.45□□□□□ -0.26
HCFC2-201ENST00000229330 PIGVQ9NUD9 493 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 MARK1Q9P0L2 795 aa13.45□□□□□ -0.26
HCFC2-201ENST00000229330 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 NFKBIEO00221 500 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 ENPP3O14638 875 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 FLT3LGP49771 235 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 OR4D2P58180 307 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 DEFB115Q30KQ5 88 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 TECRLQ5HYJ1 363 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 TMEM17Q86X19 198 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 SLC43A3Q8NBI5 491 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 CCDC107Q8WV48 283 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 DERL2Q9GZP9 239 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 EQTNQ9NQ60 294 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 TMEM181Q9P2C4 612 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
HCFC2-201ENST00000229330 ANKRD33BA6NCL7 494 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 SLC19A2O60779 497 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 DNASE1P24855 282 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 GCAP28676 217 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 RBM34P42696 430 aaKnown RBP13.44□□□□□ -0.26
HCFC2-201ENST00000229330 PSMA6P60900 246 aaKnown RBP13.44□□□□□ -0.26
HCFC2-201ENST00000229330 NOMO2Q5JPE7 1267 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 C6orf136Q5SQH8 315 aa13.44□□□□□ -0.26
HCFC2-201ENST00000229330 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms