RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SYVN1Q86TM6 617 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CUZD1Q86UP6 607 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SNX31Q8N9S9 440 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 OR4F6Q8NGB9 312 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 OR10G6Q8NH81 332 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 IFI44Q8TCB0 444 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 MAGEB10Q96LZ2 347 aaPredicted RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 CCDC3Q9BQI4 270 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SARGQ9BW04 601 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 ILKAPQ9H0C8 392 aaPredicted RBP13.52□□□□□ -0.25
SEC61B-201ENST00000223641 PELI2Q9HAT8 420 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 MID1IP1Q9NPA3 183 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 SEMA5BQ9P283 1151 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 TRPS1Q9UHF7 1281 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 ZDHHC2Q9UIJ5 367 aa13.52□□□□□ -0.25
SEC61B-201ENST00000223641 MN1Q10571 1320 aaPredicted RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 KCNE1BA0A087WTH5 132 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 A0A1W2PQM1 296 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 GSAPA4D1B5 854 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 DUX1O43812 170 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CLDN9O95484 217 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 HSPA4LO95757 839 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CDH1P12830 882 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CMPK1P30085 196 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 HNF4AP41235 474 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 LSSP48449 732 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 PPP1CAP62136 330 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 DAB2P98082 770 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 IRF8Q02556 426 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 RELAQ04206 551 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 DOC2AQ14183 400 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 RBBP7Q16576 425 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CLPPQ16740 277 aaPredicted RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 UGT3A2Q3SY77 523 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 GPRIN3Q6ZVF9 776 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 MILR1Q7Z6M3 343 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 TMPRSS11BQ86T26 416 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 KIRREL3Q8IZU9 778 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CARFQ8N187 725 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ZNF781Q8N8C0 355 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ATP6V1E2Q96A05 226 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ZUFSPQ96AP4 578 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 PTCD3Q96EY7 689 aaKnown RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CDK15Q96Q40 435 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CD180Q99467 661 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CDC6Q99741 560 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ACTR8Q9H981 624 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 SLC6A20Q9NP91 592 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 MRPS30Q9NP92 439 aaKnown RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ABCF3Q9NUQ8 709 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 TMEM184CQ9NVA4 438 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 PDP2Q9P2J9 529 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 ANKMY1Q9P2S6 941 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 FTSJ1Q9UET6 329 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 RNF11Q9Y3C5 154 aa13.51□□□□□ -0.25
SEC61B-201ENST00000223641 EP300Q09472 2414 aaPredicted RBP13.51□□□□□ -0.25
SEC61B-201ENST00000223641 COL27A1Q8IZC6 1860 aaPredicted RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 UNC13CQ8NB66 2214 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 A0A0J9YY10 115 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 H0YIV9 168 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 NTN3O00634 580 aaPredicted RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 CAPN5O15484 640 aaPredicted RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 OR4F21O95013 312 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 ENO1P06733 434 aaKnown RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 JUPP14923 745 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 MPSTP25325 297 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 CSF2RBP32927 897 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 GRIA3P42263 894 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 ACADVLP49748 655 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 RPL14P50914 215 aaKnown RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 FOXA1P55317 472 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 GNGT1P63211 74 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 XKR6Q5GH73 641 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 NKAIN2Q5VXU1 208 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 GRHL2Q6ISB3 625 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 ARMC6Q6NXE6 501 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 PLXDC1Q8IUK5 500 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 FAM20CQ8IXL6 584 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 LAS2Q8IYD9 372 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 LRRC34Q8IZ02 419 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 CLYBLQ8N0X4 340 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 DCBLD1Q8N8Z6 715 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 Q8N9G6 341 aaPredicted RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 PIWIL2Q8TC59 973 aaKnown RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 NCSTNQ92542 709 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 ZDHHC12Q96GR4 267 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 AHCYL2Q96HN2 611 aaKnown RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 PPM1MQ96MI6 270 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 DPH7Q9BTV6 452 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 EFCAB11Q9BUY7 163 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 PITHD1Q9GZP4 211 aaPredicted RBP13.5□□□□□ -0.25
SEC61B-201ENST00000223641 SEMA6CQ9H3T2 930 aa13.5□□□□□ -0.25
SEC61B-201ENST00000223641 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms