RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ELAC1Q9H777 363 aaKnown RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 TRPV5Q9NQA5 729 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 HCRTO43612 131 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ANXA8P13928 327 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ZNF33AQ06730 810 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 QPCTQ16769 361 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 NIPAL1Q6NVV3 410 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 SATL1Q86VE3 508 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 LNX2Q8N448 690 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ANKFN1Q8N957 763 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 OR9A1PQ8NGU1 263 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 HRASLS2Q9NWW9 162 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 FOXO6A8MYZ6 492 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 SLC22A2O15244 555 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 COCHO43405 550 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 RAP2AP10114 183 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 ARCN1P48444 511 aaKnown RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 CD47Q08722 323 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 GALNT2Q10471 571 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 C12orf76Q8N812 135 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-201ENST00000219334 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 FZD4Q9ULV1 537 aa18.46■□□□□ 0.55
SMPD3-201ENST00000219334 HEXBP07686 556 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 IQCF3P0C7M6 154 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 INCA1Q0VD86 236 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 UBE2J2Q8N2K1 259 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 NAT8LQ8N9F0 302 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 NKD1Q969G9 470 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 NPY6RQ99463 290 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 LRRC3Q9BY71 257 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 TBC1D17Q9HA65 648 aa18.46■□□□□ 0.54
SMPD3-201ENST00000219334 CLIC1O00299 241 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 PIRO00625 290 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 PDCD5O14737 125 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 CNTN5O94779 1100 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 GRIA1P42261 906 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 SP140Q13342 867 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 ELOAQ14241 798 aaKnown RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 GANABQ14697 944 aaKnown RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 MGME1Q9BQP7 344 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 KCNH6Q9H252 994 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 SNX4O95219 450 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 JUNP05412 331 aaKnown RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 TACSTD2P09758 323 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 POLR2CP19387 275 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF805Q5CZA5 627 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 ADNP2Q6IQ32 1131 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 OR5AK3PQ8NH89 298 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 OR2M4Q96R27 311 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 OXSMQ9NWU1 459 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 NPIPA5E9PKD4 350 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 KHNYNO15037 678 aaKnown RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 PAK4O96013 591 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-201ENST00000219334 GHDCQ8N2G8 530 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 PROKR2Q8NFJ6 384 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 LGR4Q9BXB1 951 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 DNAJB9Q9UBS3 223 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 NPIPA1Q9UND3 350 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 TMED5Q9Y3A6 229 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 Q6ZVL8 140 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 OR5M3Q8NGP4 307 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 CHCHD6Q9BRQ6 235 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 SEC61A2Q9H9S3 476 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 GRIP1Q9Y3R0 1128 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 COMMD3-BMI1R4GMX3 469 aa18.45■□□□□ 0.54
SMPD3-201ENST00000219334 A8MT66 165 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 TMEM115Q12893 351 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 PCBP2Q15366 365 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 PTCHD3Q3KNS1 767 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 IL22RA1Q8N6P7 574 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 OR56A1Q8NGH5 318 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 LRIG1Q96JA1 1093 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 DKKL1Q9UK85 242 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 RAB26Q9ULW5 256 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 SOCS5O75159 536 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF3P17036 446 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 HSD11B1P28845 292 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 UPP1Q16831 310 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 OR2L3Q8NG85 312 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 WDR92Q96MX6 357 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 PCDHGB1Q9Y5G3 927 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 LEFTY1O75610 366 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 SWI5Q1ZZU3 235 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF783Q6ZMS7 281 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF676Q8N7Q3 588 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 PHOSPHO1Q8TCT1 267 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 SMARCD2Q92925 531 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 GALPQ9UBC7 116 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 WBP11Q9Y2W2 641 aaKnown RBP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 TFECO14948 347 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 NOS1APO75052 506 aaPredicted RBP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 SLC39A4Q6P5W5 647 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 PNLDC1Q8NA58 520 aaKnown RBP18.44■□□□□ 0.54
SMPD3-201ENST00000219334 OR5K1Q8NHB7 308 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 CAPSLQ8WWF8 208 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 LRTOMTQ8WZ04 291 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 SGCDQ92629 289 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 UFD1Q92890 307 aa18.44■□□□□ 0.54
SMPD3-201ENST00000219334 C2orf74A8MZ97 194 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms