RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SMAD4Q13485 552 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PTCHD3Q3KNS1 767 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MED27Q6P2C8 311 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 HSD11B1LQ7Z5J1 315 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 EGFL6Q8IUX8 553 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TBC1D21Q8IYX1 336 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 NRSN1Q8IZ57 195 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PLD6Q8N2A8 252 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PGBD5Q8N414 524 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZFP28Q8NHY6 868 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 CPEB1Q9BZB8 566 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZSCAN32Q9NX65 697 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ATP6V1HQ9UI12 483 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PPM1HQ9ULR3 514 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 CARD8Q9Y2G2 431 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 DHRS7Q9Y394 339 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 H3BN98 237 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF37AP17032 561 aaPredicted RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MAOBP27338 520 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 NTSP30990 170 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 CLDN2P57739 230 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TIGD2Q4W5G0 525 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SUSD1Q6UWL2 747 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PIANPQ8IYJ0 282 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MAFAQ8NHW3 353 aaPredicted RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MYEOVQ96EZ4 313 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 RANBP9Q96S59 729 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SMAD5Q99717 465 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 LRTM1Q9HBL6 345 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SCML1Q9UN30 329 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TTC28Q96AY4 2481 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 A0A0G2JN53 185 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 A8MT66 165 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 OR10H2O60403 315 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 KERAO60938 352 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 THEGLP0DJG4 465 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 JUNDP17535 347 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 NELFEP18615 380 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ECHS1P30084 290 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 HOXC13P31276 330 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ATP12AP54707 1039 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 LGALS3BPQ08380 585 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 KLF10Q13118 480 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MLF2Q15773 248 aaPredicted RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZBTB46Q86UZ6 589 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 GPR180Q86V85 440 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 HIPK1Q86Z02 1210 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZCCHC10Q8TBK6 192 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 CADM1Q9BY67 442 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 POLR3HQ9Y535 204 aaPredicted RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 EME2A4GXA9 379 aaPredicted RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PRRT4C9JH25 899 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 LDB2O43679 373 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 GTF2E2P29084 291 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 OXTRP30559 389 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SRP54P61011 504 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SEMA3AQ14563 771 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TGFBIQ15582 683 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 C5orf22Q49AR2 442 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PDCD4Q53EL6 469 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 GALNT18Q6P9A2 607 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 AGTRAPQ6RW13 159 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PROSER1Q86XN7 944 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 FOXJ1Q92949 421 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 USP7Q93009 1102 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TAC3Q9UHF0 121 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 RPS6KA6Q9UK32 745 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 PLAGL1Q9UM63 463 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 SIT1Q9Y3P8 196 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 LOC285095A0A1B0GVY8 99 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 AP2A2O94973 939 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 ALDOAP04075 364 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PRKAR1AP10644 381 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 EPORP19235 508 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PAICSP22234 425 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 HNRNPA2B1P22626 353 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PRDX6P30041 224 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 CDK9P50750 372 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 CYP4V2Q6ZWL3 525 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 RPS27LQ71UM5 84 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 SATL1Q86VE3 508 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 TMC8Q8IU68 726 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 Q96MT0 163 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 RPP25Q9BUL9 199 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 PRSS16Q9NQE7 514 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 APOBEC3BQ9UH17 382 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 INTS6Q9UL03 887 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 BBIP1A8MTZ0 92 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 CLDN25C9JDP6 229 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 HOXC11O43248 304 aaPredicted RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 KLHL18O94889 574 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 SLC35G6P0C7Q6 338 aa9.15□□□□□ -0.94
CCDC113-201ENST00000219299 IDH2P48735 452 aaKnown RBP9.15□□□□□ -0.94
CCDC113-201ENST00000219299 STX4Q12846 297 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms