RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FAM220BPB1ANY3 271 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 GFRA2O00451 464 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 SLC25A14O95258 325 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 CCNDBP1O95273 360 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 NUDT7P0C024 238 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 HTR3AP46098 478 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 MAD2L1Q13257 205 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 TSTQ16762 297 aaKnown RBP19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 GGHQ92820 318 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 PHOX2BQ99453 314 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 C1QTNF3Q9BXJ4 246 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 ELOVL6Q9H5J4 265 aa19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 RPRD1BQ9NQG5 326 aaKnown RBP19.52■□□□□ 0.72
PPP1R3F-201ENST00000055335 FAM172BPA6NC97 362 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 TAPBPO15533 448 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PRAMEF11O60813 436 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 CXCR4P61073 352 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 TAF1AQ15573 450 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 C16orf59Q7L2K0 433 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 IPCEF1Q8WWN9 437 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 C1orf74Q96LT6 269 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 FEVQ99581 238 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PCDHB9Q9Y5E1 797 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PCDHGA6Q9Y5G7 932 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PEX16Q9Y5Y5 336 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 MBLAC1A4D2B0 266 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 ERN1O75460 977 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 EPB42P16452 691 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 MYDGFQ969H8 173 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 UBA2Q9UBT2 640 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 DUSP12Q9UNI6 340 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PPP2R3BQ9Y5P8 575 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 LAMA3Q16787 3333 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PRRC2BQ5JSZ5 2229 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PNMA8CA0A1B0GUJ8 204 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 GRXCR2A6NFK2 248 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 HAS3O00219 553 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 SLC28A1O00337 649 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 TNFRSF10BO14763 440 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 ALPIP09923 528 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 KDELR2P33947 212 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 ABHD18Q0P651 414 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 SLAMF1Q13291 335 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 CLPPQ16740 277 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 LKAAEAR1Q8TD35 194 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 OR5M11Q96RB7 305 aa19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 NUFIP1Q9UHK0 495 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-201ENST00000055335 EFCAB10A6NFE3 127 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 MANBAO00462 879 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FPGTO14772 594 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 PRAMEF12O95522 483 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FHP07954 510 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FADDQ13158 208 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 CLECL1Q8IZS7 167 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 GLB1L3Q8NCI6 653 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 NPLOC4Q8TAT6 608 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 KCNJ9Q92806 393 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FAM126AQ9BYI3 521 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 INSIG1O15503 277 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 PDYNP01213 254 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FAM209AQ5JX71 171 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 FBLIM1Q8WUP2 373 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 GTPBP3Q969Y2 492 aaKnown RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 RANGRFQ9HD47 186 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SPASTQ9UBP0 616 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SLC6A14Q9UN76 642 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 LYVE1Q9Y5Y7 322 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 CPNE3O75131 537 aaKnown RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 KRR1Q13601 381 aaKnown RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 PARP15Q460N3 678 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SLC46A3Q7Z3Q1 461 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 RAB43Q86YS6 212 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 BEND7Q8N7W2 519 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 OR7G1Q8NGA0 311 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SLC30A2Q9BRI3 323 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 ACPTQ9BZG2 426 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 CCDC177Q9NQR7 707 aaPredicted RBP19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 SNTG1Q9NSN8 517 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 RLIMQ9NVW2 624 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 VPS9D1Q9Y2B5 631 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 CCL27Q9Y4X3 112 aa19.5■□□□□ 0.71
PPP1R3F-201ENST00000055335 BRCA1P38398 1863 aaKnown RBP19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 ADORA3P0DMS8 318 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 IFI30P13284 250 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 BMP1P13497 986 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 PRKCAP17252 672 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 MRPL19P49406 292 aaKnown RBP19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 RGS6P49758 472 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 UGT2B15P54855 530 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 TAF10Q12962 218 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 SEPT5Q99719 369 aaPredicted RBP19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 KCNH6Q9H252 994 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 CCSER2Q9H7U1 834 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 SERHLQ9NQF3 203 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 PPT2Q9UMR5 302 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 WASH4PA8MWX3 477 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 PDHXO00330 501 aa19.49■□□□□ 0.71
PPP1R3F-201ENST00000055335 EPOP01588 193 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms