RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 OR52E6Q96RD3 313 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 KCNH6Q9H252 994 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 CCM2LQ9NUG4 571 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 GEMIN8Q9NWZ8 242 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 PCDHB3Q9Y5E6 796 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 A0A096LPI6 279 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 C2CD4DB7Z1M9 353 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 MYO1DO94832 1006 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 CEACAM5P06731 702 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 S100A3P33764 101 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 PHC1P78364 1004 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 ACSM2AQ08AH3 577 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 HIST2H2ACQ16777 129 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 SPIN4Q56A73 249 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 EOGTQ5NDL2 527 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 ACSM2BQ68CK6 577 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 HIST2H2AA3Q6FI13 130 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 CYP2R1Q6VVX0 501 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 LPCAT2Q7L5N7 544 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 TMPRSS11BQ86T26 416 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 PROSER1Q86XN7 944 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 DENND6BQ8NEG7 585 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 OR5AR1Q8NGP9 310 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 HUS1BQ8NHY5 278 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 NUDT8Q8WV74 236 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 PPM1MQ96MI6 270 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 MTERF1Q99551 399 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 PKP2Q99959 881 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 BTBD1Q9H0C5 482 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 PCBD2Q9H0N5 130 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 TRIT1Q9H3H1 467 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 RMND5AQ9H871 391 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 KCNK12Q9HB15 430 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 TM7SF3Q9NS93 570 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 CNOT11Q9UKZ1 510 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 NCKAP1Q9Y2A7 1128 aa13.82□□□□□ -0.2
RTFDC1-201ENST00000023939 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 MAGEB17A8MXT2 336 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 FUCA1P04066 466 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 GPIP06744 558 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SLC35G4P0C7Q5 338 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 HOXB9P17482 250 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 GRIA3P42263 894 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PIK3CBP42338 1070 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SRSF11Q05519 484 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SLBPQ14493 270 aaKnown RBP eCLIP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 RUNDC3AQ59EK9 446 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PRAMEF14Q5SWL7 426 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 CATSPEREQ5SY80 951 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PRAMEF13Q5VWM6 474 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 MSRB3Q8IXL7 192 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 CLHC1Q8NHS4 586 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 ITCHQ96J02 903 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 CCDC115Q96NT0 180 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TSSK3Q96PN8 268 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 BTBD9Q96Q07 612 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 MENTQ9BUN1 341 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 APOOQ9BUR5 198 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SLC6A17Q9H1V8 727 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TTYH1Q9H313 450 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 VAPAQ9P0L0 249 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SH2B3Q9UQQ2 575 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3DA0A087WVF3 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3IA0A087WXS9 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3EA0A087X179 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3KA0A087X1G2 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PIPSLA2A3N6 862 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3FA6NER0 549 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3LB9A6J9 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 DFNA5O60443 496 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3HP0C7X1 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 UMPSP11172 480 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 ASMTP46597 345 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 KIAA1024LP59773 190 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PYCR3Q53H96 274 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SFT2D3Q587I9 215 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3GQ6DHY5 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3CQ6IPX1 549 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 IRGCQ6NXR0 463 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TRIM69Q86WT6 500 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TBC1D3Q8IZP1 549 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 RNF175Q8N4F7 328 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PHC3Q8NDX5 983 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 KLK6Q92876 244 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 MRGPRX1Q96LB2 322 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PAIP1Q9H074 479 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 EGFL7Q9UHF1 273 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 MAGEL2Q9UJ55 1249 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
RTFDC1-201ENST00000023939 TCRBV5S2A0A599 114 aa13.8□□□□□ -0.2
RTFDC1-201ENST00000023939 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms