RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TRNP1Q6NT89 227 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 HAGHLQ6PII5 290 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 CRTC1Q6UUV9 634 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 ASB18Q6ZVZ8 466 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 SERPINA9Q86WD7 417 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 ARNTL2Q8WYA1 636 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 NELL1Q92832 810 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 KCNA7Q96RP8 456 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 ZCCHC2Q9C0B9 1178 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 ATG10Q9H0Y0 220 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 ZDHHC7Q9NXF8 308 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 SAMD4AQ9UPU9 718 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 TESMINQ9Y4I5 508 aa11.84□□□□□ -0.51
TSPAN9-201ENST00000011898 PGRMC2O15173 223 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PAICSP22234 425 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 RPL10P27635 214 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TAF1AQ15573 450 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 UGT8Q16880 541 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 FUT10Q6P4F1 479 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 BORAQ6PGQ7 559 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PTCHD4Q6ZW05 846 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 RBM23Q86U06 439 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SLC13A3Q8WWT9 602 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 MAELQ96JY0 434 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 MMP27Q9H306 513 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 FANCFQ9NPI8 374 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SMOXQ9NWM0 555 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SPG21Q9NZD8 308 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SYN3O14994 580 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 KPNA5O15131 536 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 KERAO60938 352 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TNNI3P19429 210 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 NPR2P20594 1047 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 CAPZA2P47755 286 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ANXA11P50995 505 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 NKX3-2P78367 333 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 FXNQ16595 210 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ATP13A5Q4VNC0 1218 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PJA1Q8NG27 643 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PIH1D2Q8WWB5 315 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 REPS1Q96D71 796 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SUSD3Q96L08 255 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 DPCDQ9BVM2 203 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ADAMTS10Q9H324 1103 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ANKRA2Q9H9E1 313 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PCDHB16Q9NRJ7 776 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PAK1IP1Q9NWT1 392 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 SPO11Q9Y5K1 396 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 FAM234BA2RU67 622 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 ENPP3O14638 875 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TLL1O43897 1013 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 CLDN9O95484 217 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 MAGEA6P43360 314 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 CDKL1Q00532 357 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 FGFBP1Q14512 234 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TMEM126BQ8IUX1 230 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 HID1Q8IV36 788 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TTC29Q8NA56 475 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 LGALS12Q96DT0 336 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 NUFIP1Q9UHK0 495 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 PHF11Q9UIL8 331 aa11.83□□□□□ -0.52
TSPAN9-201ENST00000011898 TCRBV5S1A1TA0A578 114 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 SUV39H1O43463 412 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 NPPAP01160 153 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 GNAO1P09471 354 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 SLC2A2P11168 524 aaPredicted RBP11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 RPL17P18621 184 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 DGKQP52824 942 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 XKRXQ6PP77 449 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 SNX20Q7Z614 316 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 PSD4Q8NDX1 1056 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 TMEM74Q96NL1 305 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 ERVK13-1Q9NX77 482 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 KCTD5Q9NXV2 234 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 FCF1Q9Y324 198 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 IGHA2P01877 340 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 RAP2AP10114 183 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 EVI2BP34910 448 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 DIO3P55073 304 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 DNAJB13P59910 316 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 PPP2R2BQ00005 443 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 HMGCS1Q01581 520 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 TAZQ16635 292 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 ZNF767PQ75MW2 155 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 SLC15A3Q8IY34 581 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 ZBTB2Q8N680 514 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 TMEM40Q8WWA1 233 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 POP5Q969H6 163 aaKnown RBP11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 MTMR10Q9NXD2 777 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 A0A1W2PP18 115 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 MEIS3P2A8K0S8 358 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 KCNQ1P51787 676 aa11.82□□□□□ -0.52
TSPAN9-201ENST00000011898 PGDP52209 483 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms