RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 HOXA9P31269 272 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 NR4A2P43354 598 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 KRT6CP48668 564 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 DUSP4Q13115 394 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 DSC3Q14574 896 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PRSS36Q5K4E3 855 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 KIAA1614Q5VZ46 1190 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 STEAP3Q658P3 488 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PDE12Q6L8Q7 609 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ZNF621Q6ZSS3 439 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PRSS48Q7RTY5 328 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CCDC71Q8IV32 467 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SKA2Q8WVK7 121 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 EBPLQ9BY08 206 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 IL1RAPQ9NPH3 570 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CCDC177Q9NQR7 707 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 OSGIN1Q9UJX0 560 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PCDHB1Q9Y5F3 818 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 GREB1Q4ZG55 1949 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 OR2A25A4D2G3 310 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CCRL2O00421 344 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 STK16O75716 305 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 GJB5O95377 273 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 F11P03951 625 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 EIF2S1P05198 315 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PTPN2P17706 415 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ENPP1P22413 925 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 GADD45AP24522 165 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TGFBR2P37173 567 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SLC11A2P49281 568 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CXCR4P61073 352 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 RING1Q06587 406 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TTC23LQ6PF05 361 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TRIM46Q7Z4K8 759 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 DNASE1L2Q92874 299 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SLC38A4Q969I6 547 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 COPS4Q9BT78 406 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ITPAQ9BY32 194 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TM6SF2Q9BZW4 377 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ELOVL6Q9H5J4 265 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 RUBCNLQ9H714 662 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 REEP1Q9H902 201 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 GKN1Q9NS71 199 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SIRT5Q9NXA8 310 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 NDRG4Q9ULP0 352 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PPT2Q9UMR5 302 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 IFT52Q9Y366 437 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PATJQ8NI35 1801 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TAF4O00268 1085 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CDK2AP1O14519 115 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ASNA1O43681 348 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 MTRF1O75570 445 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CLDN9O95484 217 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 MSL3P1P0C860 447 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 EBLN1P0CF75 366 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 COL6A1P12109 1028 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 AKR1A1P14550 325 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SPNP16150 400 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 AQP1P29972 269 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 MAGEA2P43356 314 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CLDN8P56748 225 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 MVKQ03426 396 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SMU1Q2TAY7 513 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 SOWAHCQ53LP3 525 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 LRIF1Q5T3J3 769 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TSPYL5Q86VY4 417 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 HEATR4Q86WZ0 1026 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CCDC103Q8IW40 242 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 ELMOD1Q8N336 334 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 HSH2DQ96JZ2 352 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 KCNC2Q96PR1 638 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 PANX1Q96RD7 426 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 TNKS2Q9H2K2 1166 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 THUMPD1Q9NXG2 353 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 FCF1Q9Y324 198 aaKnown RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CAB39Q9Y376 341 aaPredicted RBP10.22□□□□□ -0.77
CX3CL1-201ENST00000006053 CLIC1O00299 241 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 WBP4O75554 376 aaKnown RBP10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 WDR47O94967 919 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 ENGP17813 658 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 HOXD10P28358 340 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 NUDT6P53370 316 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 CYP4F2P78329 520 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 SEMG2Q02383 582 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 NPRL3Q12980 569 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 RNF175Q8N4F7 328 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 CARNMT1Q8N4J0 409 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 ZBTB2Q8N680 514 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 DTX3Q8N9I9 347 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 PSD4Q8NDX1 1056 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 TP63Q9H3D4 680 aaPredicted RBP10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 C12orf4Q9NQ89 552 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 IL37Q9NZH6 218 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 TRPS1Q9UHF7 1281 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 CRLS1Q9UJA2 301 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 RNF6Q9Y252 685 aa10.21□□□□□ -0.77
CX3CL1-201ENST00000006053 HSPE1-MOB4S4R3N1 261 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms