RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Svs4P18419 113 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fv1P70213 459 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 GnrhrQ01776 327 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pea15Q62048 130 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ptpn21Q62136 1176 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc15a3Q8BPX9 578 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lats1Q8BYR2 1129 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tcf7l1Q9Z1J1 584 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Znf541Q0GGX2 1363 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp2b13A6H6J2 491 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr741L7N1Y5 311 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 SmsP97355 366 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pecam1Q08481 727 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tmem69Q3KQJ0 245 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Arhgap20Q6IFT4 1182 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cst13Q80ZN5 141 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Map1sQ8C052 973 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bbs4Q8C1Z7 520 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 PpcsQ8VDG5 311 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fam118aQ91YN1 357 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mrps2Q924T2 291 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 PtgfrnQ9WV91 879 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sac3d1A6H687 427 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 GzmgP13366 248 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pex2P55098 305 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lhfpl3Q9CTN8 222 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Shroom3Q9QXN0 1986 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm33543A0A1B0GSI5 81 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sap18O55128 153 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 UgcgO88693 394 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 SrcP05480 541 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Npr3P70180 536 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fscn2Q32M02 492 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sema4aQ62178 760 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vamp1Q62442 118 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1499Q8VG65 314 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Wrnip1Q91XU0 660 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ildr2B5TVM2 661 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ppef1O35655 650 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cops5O35864 334 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Foxr1Q3UTB7 268 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cdh7Q8BM92 785 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnajc24Q91ZF0 196 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cers5Q9D6K9 414 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm4131A0A140LJ24 318 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm10338K7N692 204 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1564K7N6V7 318 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1022L7MTT3 315 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Proser3Q7TSA6 634 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mcph1Q7TT79 822 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ugt2b35Q8BJL9 529 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cep68Q8C0D9 733 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 AA792892Q8C6S1 278 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1094Q8VF13 330 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr586Q8VH13 317 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Diras1Q91Z61 198 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mrpl21Q9D1N9 209 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nmnat1Q9EPA7 285 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 B4galt5Q9JMK0 388 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dlg5E9Q9R9 1921 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Spin2dB1B0R2 236 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 S100a1P56565 94 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Syndig1lQ3USQ7 237 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bpifb1Q61114 474 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fstl1Q62356 306 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Prkd2Q8BZ03 875 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nt5dc1Q8C5P5 467 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc15a5Q8CBB2 566 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr385Q8VGT1 312 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pno1Q9CPS7 248 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bclaf3A2AG58 752 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Phf11bB4XVQ1 276 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 NagluO88325 739 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfp62Q8C827 914 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gpn1Q8VCE2 372 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dok4Q99KE3 325 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tatdn2B7ZNL9 783 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vmn2r24D3YUI0 854 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cdk5r2O35926 369 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gna12P27600 379 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Plk2P53351 682 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ntsr2P70310 416 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Srebf2Q3U1N2 1130 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Laptm5Q61168 261 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 NdnfQ8C119 568 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 WrbQ8K0D7 174 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 PtprtQ99M80 1454 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gon4lQ9DB00 2260 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 C9P06683 548 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Aqp4P55088 323 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lhx1P63006 406 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 IspdQ5RJG7 447 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Itih5Q8BJD1 952 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dlec1Q8BLA1 635 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fam92aQ8BP22 355 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tcf25Q8R3L2 676 aaKnown RBP11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc8b1Q925Q3 585 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Acbd6Q9D061 282 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Smok1Q9QYZ4 484 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm36210A0A1B0GS00 229 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms