RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Vmn2r114E9Q281 856 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Kcnk1O08581 336 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Prl4a1O35256 227 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 EdnrbP48302 442 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Crisp1Q03401 244 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Q3KQP7 184 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ppp3r1Q63810 170 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Doc2aQ7TNF0 405 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Hsfy2Q80Y37 392 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Bmp3Q8BHE5 468 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Hmbox1Q8BJA3 419 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sec22cQ8BXT9 303 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ebna1bp2Q9D903 306 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 NckipsdQ9ESJ4 714 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cst9Q9Z0H6 137 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm17190V9GX38 357 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Camta1A2A891 1682 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm4756A0A140LIS8 335 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm14459A2BI73 179 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Serpine3E9Q6A2 401 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 ApoeP08226 311 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 MutP16332 748 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sept4P28661 478 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cfl2P45591 166 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Adamts15P59384 950 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Irf7P70434 457 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Serpinf1P97298 417 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 GiprQ0P543 460 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Defb23Q30KP0 166 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 B3gnt3Q5JCS9 372 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Nomo1Q6GQT9 1214 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Syt16Q7TN83 639 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr735Q7TRM4 354 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Exd1Q8CDF7 570 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Zmynd11Q8R5C8 602 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Q91W34 466 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slc5a2Q923I7 670 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cnot11Q9CWN7 505 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 EqtnQ9D9V2 337 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Kiaa0141Q9DCV6 510 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slamf1Q9QUM4 343 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 DstnQ9R0P5 165 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 CitP49025 2055 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Grin3aA2AIR5 1135 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Zfp738B8JJX8 793 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Ap1arE9PYF7 298 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Spdye4cI6XKQ3 339 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Vmn2r102L7N279 857 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Tcf3P15806 651 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rab2aP53994 212 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Tmprss11eQ5S248 423 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr667Q7TRP4 326 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Phf11aQ8BVM9 293 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gatad2aQ8CHY6 629 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fbxl20Q9CZV8 436 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Izumo1Q9D9J7 397 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Uqcrc2Q9DB77 453 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 GmfgQ9ERL7 142 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Epb41l4bQ9JMC8 527 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Heg1E9Q7X6 1337 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fam83cA2ARK0 776 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm8050L7N2E3 205 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Psmd3P14685 530 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 ArvcfP98203 962 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Rnf180Q3U827 592 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Taar7fQ5QD08 358 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Taar7eQ5QD09 358 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Taar7bQ5QD11 358 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fbxo42Q6PDJ6 717 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gsto2Q8K2Q2 248 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slc36a1Q8K4D3 475 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Acsm1Q91VA0 573 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Trem2Q99NH8 227 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm10720D3Z1I5 223 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pdzd7E9Q9W7 1021 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Limk2O54785 638 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Fzd1O70421 642 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 TktP40142 623 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Dpf3P58269 378 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Slc45a4Q0P5V9 785 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Mthfd1lQ3V3R1 977 aaKnown RBP9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Serpina12Q7TMF5 413 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Kctd12bQ8C7J6 292 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Olfr1278Q8VF39 313 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pcdhgc3Q91XX1 934 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pcdhga11Q91XY8 933 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 Sec13Q9D1M0 322 aa9.61□□□□□ -0.87
Syne1-201ENSMUST00000041639 PplQ9R269 1755 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Nav1Q8CH77 1875 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 A0A286YD17 136 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm6592A2AHC7 168 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 CK137956B1AYM9 596 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Pdia2D3Z6P0 527 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm3594E9Q2A7 267 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gm9493F6SVV1 192 aaKnown RBP9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 TsxP70675 144 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Opa3Q505D7 179 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 PkdccQ5RJI4 492 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Cpa6Q5U901 438 aa9.6□□□□□ -0.87
Syne1-201ENSMUST00000041639 Gpalpp1Q69ZC8 346 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms