RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SIRT5Q9NXA8 310 aa16.33■□□□□ 0.2
PHGDH-223ENST00000641597 REV3LO60673 3130 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 E7EQ34 232 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 LEFTY2O00292 366 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 BCKDKO14874 412 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 LAMP1P11279 417 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 GSTM2P28161 218 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 WEE1P30291 646 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 TGFBR1P36897 503 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SPINT3P49223 89 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FPGSQ05932 587 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 GRSF1Q12849 480 aaKnown RBP eCLIP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CDK5R2Q13319 367 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 GBX1Q14549 363 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 ZNF691Q5VV52 312 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FRG2Q64ET8 278 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 Q6ZNX1 250 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FAM217AQ8IXS0 508 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 TCEAL8Q8IYN2 117 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 AADATQ8N5Z0 425 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 OR5K1Q8NHB7 308 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FIBINQ8TAL6 211 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FRG2BQ96QU4 278 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 ALOXE3Q9BYJ1 711 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 YTHDF1Q9BYJ9 559 aaKnown RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SLC29A3Q9BZD2 475 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 ARMC7Q9H6L4 198 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 RASSF1Q9NS23 344 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 LSM7Q9UK45 103 aaKnown RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 BAG5Q9UL15 447 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CLIC1O00299 241 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 FPGTO14772 594 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 TGM5O43548 720 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SGTAO43765 313 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 BCL10O95999 233 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 GBAP04062 536 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 HIST1H2AGP0C0S8 130 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 JUNBP17275 347 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 HIST1H2ADP20671 130 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 IGFBP5P24593 272 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 KIR3DL1P43629 444 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CLK3P49761 638 aaKnown RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CCR3P51677 355 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 WNT3P56703 355 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 C21orf59P57076 290 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 EMX1Q04741 257 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 DGCR6Q14129 220 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 USP45Q70EL2 814 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 CBARPQ8N350 705 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-223ENST00000641597 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 ELMO1Q92556 727 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SH3KBP1Q96B97 665 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 ECHDC3Q96DC8 303 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 MED8Q96G25 268 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 HIST1H2AHQ96KK5 128 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 HIST1H2AJQ99878 128 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SH3GL1Q99961 368 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 H2AFJQ9BTM1 129 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 SNX6Q9UNH7 406 aa16.32■□□□□ 0.2
PHGDH-223ENST00000641597 NOL3O60936 208 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 KCNK5O95279 499 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 NTRK1P04629 796 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 TNFRSF1BP20333 461 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 PCMT1P22061 227 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 HOXD10P28358 340 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CD6P30203 668 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 TTKP33981 857 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 SNRPD1P62314 119 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 RBM48Q5RL73 367 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CRTC3Q6UUV7 619 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CCDC81Q6ZN84 652 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 EGFL6Q8IUX8 553 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 SYT12Q8IV01 421 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 GPR156Q8NFN8 814 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CYB5D2Q8WUJ1 264 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 REXO5Q96IC2 774 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 NODALQ96S42 347 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CORO1BQ9BR76 489 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 LINC00597Q9H2U6 94 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 ASIC5Q9NY37 505 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 USE1Q9NZ43 259 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 MAN2B2Q9Y2E5 1009 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 GOLGA4Q13439 2230 aaKnown RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 SCN2BO60939 215 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 OR56A5P0C7T3 313 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 ATP1B2P14415 290 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-223ENST00000641597 CRYBA2P53672 197 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 TMBIM6P55061 237 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 LYPLAL1Q5VWZ2 237 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 B3GNT8Q7Z7M8 397 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 PTOV1Q86YD1 416 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 SVOPLQ8N434 492 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 SMYD1Q8NB12 490 aa16.31■□□□□ 0.2
PHGDH-223ENST00000641597 MRPS31Q92665 395 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms