RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 AP2B1P63010 937 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 RPL38P63173 70 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PPP2CAP67775 309 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TRAP1Q12931 704 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 DOC2AQ14183 400 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 MAP7Q14244 749 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PLA2G4EQ3MJ16 856 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 THEMIS2Q5TEJ8 643 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 IL23RQ5VWK5 629 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ZFP1Q6P2D0 407 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PAOXQ6QHF9 649 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ENPP7Q6UWV6 458 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SLCO4C1Q6ZQN7 724 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 FAM83HQ6ZRV2 1179 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TMPRSS11BQ86T26 416 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 FUNDC1Q8IVP5 155 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 LAS2Q8IYD9 372 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TMEM145Q8NBT3 493 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 OR2T11Q8NH01 316 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 WDR20Q8TBZ3 569 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 KLK6Q92876 244 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SLC22A18Q96BI1 424 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 PYCR2Q96C36 320 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 MARK4Q96L34 752 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 C12orf66Q96MD2 445 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SH3GL1Q99961 368 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 AIF1LQ9BQI0 150 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 CENPKQ9BS16 269 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ACPTQ9BZG2 426 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 TRIM15Q9C019 465 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 OSGEPL1Q9H4B0 414 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 DENND2DQ9H6A0 471 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 KIR3DX1Q9H7L2 352 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 RMND5AQ9H871 391 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 CARS2Q9HA77 564 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SPATA6Q9NWH7 488 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 AHSPQ9NZD4 102 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 STOML1Q9UBI4 398 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SUCOQ9UBS9 1254 aaKnown RBP9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SLC23A2Q9UGH3 650 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 SLC7A8Q9UHI5 535 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 ANGPTL2Q9UKU9 493 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 GPSM3Q9Y4H4 160 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 DGKBQ9Y6T7 804 aa9.41□□□□□ -0.9
PHGDH-215ENST00000641371 FAM221BA6H8Z2 402 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PDZK1P1A8MUH7 402 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 E7EQ34 232 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SOX1O00570 391 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SEMA3DO95025 777 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 RASGRP1O95267 797 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 NPPBP16860 134 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 HOXB6P17509 224 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PRPS1L1P21108 318 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 HNRNPH1P31943 449 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SHMT2P34897 504 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 RPS9P46781 194 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 CCR8P51685 355 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ARFIP1P53367 373 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 DIO3P55073 304 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SRSF11Q05519 484 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ACSM2AQ08AH3 577 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ILF3Q12906 894 aaKnown RBP eCLIP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 BNIP2Q12982 314 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 CCDC6Q16204 474 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PIGGQ5H8A4 983 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 TCHHL1Q5QJ38 904 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ACSM2BQ68CK6 577 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 C8orf82Q6P1X6 216 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SLC36A4Q6YBV0 504 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 FAM124AQ86V42 546 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 IQCHQ86VS3 1027 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 RBM12BQ8IXT5 1001 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 LRRC56Q8IYG6 542 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 NATD1Q8N6N6 113 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 DCBLD1Q8N8Z6 715 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 GOLM1Q8NBJ4 401 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ABHD11Q8NFV4 315 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 TNIP2Q8NFZ5 429 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 OR5AR1Q8NGP9 310 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 OR2L8Q8NGY9 312 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SH3KBP1Q96B97 665 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 TESCQ96BS2 214 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 ASB9Q96DX5 294 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
PHGDH-215ENST00000641371 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 BMFQ96LC9 184 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 QRFPRQ96P65 431 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 OR4K3Q96R72 315 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 FERD3LQ96RJ6 166 aa9.4□□□□□ -0.9
PHGDH-215ENST00000641371 PRPF18Q99633 342 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms