RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 OR5AK3PQ8NH89 298 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 RAD9AQ99638 391 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 WDR12Q9GZL7 423 aaKnown RBP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OR51B5Q9H339 312 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 PRSS51A0A1B0GVH4 220 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 AURKAO14965 403 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OPN1SWP03999 348 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 JAK1P23458 1154 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 PAQR9Q6ZVX9 377 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 GORASP1Q9BQQ3 440 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 ELOVL2Q9NXB9 296 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 FBXL12Q9NXK8 326 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 IRGMA1A4Y4 181 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 SCN2BO60939 215 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 AP2A2O94973 939 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OAS1P00973 400 aaKnown RBP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 IFNGP01579 166 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 RAB33AQ14088 237 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 TAB1Q15750 504 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 NANOGP8Q6NSW7 305 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 FAM43BQ6ZT52 329 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 PDSS2Q86YH6 399 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 NANOGQ9H9S0 305 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 AMBNQ9NP70 447 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 CTPS2Q9NRF8 586 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 FAM120CQ9NX05 1096 aaKnown RBP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 TPST2O60704 377 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 LATS1O95835 1130 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 RYKP34925 604 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 ETV3P41162 512 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 DSC3Q14574 896 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OR2T5Q6IEZ7 315 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 FAM220AQ7Z4H9 259 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OXR1Q8N573 874 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 OR2T29Q8NH02 315 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 CMTM7Q96FZ5 175 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 A0A1B0GW55 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 CREG1O75629 220 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 SRPRAP08240 638 aaKnown RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L2P0CJ85 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L3P0CJ86 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L4P0CJ87 422 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L5P0CJ88 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L6P0CJ89 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4L7P0CJ90 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 AKT2P31751 481 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 NRIP1P48552 1158 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 CLK3P49761 638 aaKnown RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 CRISP3P54108 245 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF155Q12901 538 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 TAZQ16635 292 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 RGMAQ96B86 450 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 SLC22A18Q96BI1 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 COPS4Q9BT78 406 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DNAAF2Q9NVR5 837 aaKnown RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DUX4Q9UBX2 424 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 G3V2L1 256 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 MPZL2O60487 215 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 IL7RP16871 459 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF805Q5CZA5 627 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 SUSD1Q6UWL2 747 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 FAM110BQ8TC76 370 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ANKRD49Q8WVL7 239 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 GPATCH1Q9BRR8 931 aaKnown RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 PTGDR2Q9Y5Y4 395 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
SCARB2-223ENST00000640640 CEACAM7Q14002 265 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 MINDY4Q4G0A6 757 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 RAB41Q5JT25 222 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 RTL4Q6ZR62 310 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 APCDD1Q8J025 514 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 ADAP2Q9NPF8 381 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
SCARB2-223ENST00000640640 TMEM189-UBE2V1I3L0A0 370 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 GBAP04062 536 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ACRV1P26436 265 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 NCBP2P52298 156 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ASRGL1Q7L266 308 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 AP3S1Q92572 193 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 GLYATL1Q969I3 302 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 PRKAB1Q9Y478 270 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CCDC85CA6NKD9 419 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 M0QX08 132 aa17.09■□□□□ 0.33
SCARB2-223ENST00000640640 CSNK2A2P19784 350 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms