RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 SOX11P35716 441 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PREPP48147 710 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 FNDC3BQ53EP0 1204 aaKnown RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 LDLRAP1Q5SW96 308 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 NEK10Q6ZWH5 1172 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 LIX1Q8N485 282 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 ARRDC3Q96B67 414 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 DTD2Q96FN9 168 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 LRTM1Q9HBL6 345 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 SCOCQ9UIL1 159 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 SNX13Q9Y5W8 968 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 TCRBV21S2A2A0A5A6 115 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 K7ESM1 405 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 SEC22BO75396 215 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 TIPRLO75663 272 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PRNPP04156 253 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 GSTM1P09488 218 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 HOXB2P14652 356 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 ZNF26P17031 533 aaPredicted RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 OXTRP30559 389 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 MPLP40238 635 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PRLHRP49683 370 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 NEK2P51955 445 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 AP1S2P56377 157 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PFN3P60673 137 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 GSTM4Q03013 218 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 TMEM115Q12893 351 aaPredicted RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 IMPG1Q17R60 797 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 SPATS1Q496A3 300 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 GGTA1PQ4G0N0 100 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PMS2CLQ68D20 193 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 GALNT4Q8N4A0 578 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 KRTCAP2Q8N6L1 136 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 CATSPER1Q8NEC5 780 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 MCOLN3Q8TDD5 553 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 COQ10AQ96MF6 247 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 KCTD14Q9BQ13 255 aaPredicted RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 ZDHHC4Q9NPG8 344 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 GULP1Q9UBP9 304 aa13.44□□□□□ -0.26
ATRIP-208ENST00000639561 EIF3LQ9Y262 564 aaKnown RBP13.44□□□□□ -0.26
ATRIP-208ENST00000639561 CEP250Q9BV73 2442 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 TXNDC9O14530 226 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 SLC30A4O14863 429 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 NPC1O15118 1278 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 STAMBPO95630 424 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 KRT6AP02538 564 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 KRT6BP04259 564 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 NCK1P16333 377 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 ITGB7P26010 798 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 KRT6CP48668 564 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PLIN5Q00G26 463 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 ABRQ12979 859 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 SELPLGQ14242 412 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 SMU1Q2TAY7 513 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 CCSMST1Q4G0I0 132 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 AMIGO2Q86SJ2 522 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 TRIM74Q86UV6 250 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PTRH1Q86Y79 214 aaKnown RBP13.43□□□□□ -0.26
ATRIP-208ENST00000639561 EGFL6Q8IUX8 553 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 HID1Q8IV36 788 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 AQP12AQ8IXF9 295 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 HMGB4Q8WW32 186 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 MIEF2Q96C03 454 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
ATRIP-208ENST00000639561 ARMC1Q9NVT9 282 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 C1orf109Q9NX04 203 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 CIDEBQ9UHD4 219 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 DLGAP4Q9Y2H0 992 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.43□□□□□ -0.26
ATRIP-208ENST00000639561 DHRS12A0PJE2 317 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PSMD11O00231 422 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PSIP1O75475 530 aaKnown RBP13.43□□□□□ -0.26
ATRIP-208ENST00000639561 NPPAP01160 153 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 LINGO3P0C6S8 592 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 LIMK1P53667 647 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 MTPNP58546 118 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 MAD2L1Q13257 205 aaPredicted RBP13.43□□□□□ -0.26
ATRIP-208ENST00000639561 ZNF234Q14588 700 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 FAM174BQ3ZCQ3 159 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 SYTL3Q4VX76 610 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PLA2G2CQ5R387 149 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 IRAK1BP1Q5VVH5 260 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 EGFLAMQ63HQ2 1017 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 CHPFQ8IZ52 775 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 NRSN1Q8IZ57 195 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PGBD3Q8N328 593 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 L3MBTL4Q8NA19 623 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 PHC3Q8NDX5 983 aa13.43□□□□□ -0.26
ATRIP-208ENST00000639561 CLHC1Q8NHS4 586 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms