RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ABCF3Q9NUQ8 709 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 ZC3H7BQ9UGR2 993 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 PCM1Q15154 2024 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 CCDC88CQ9P219 2028 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 OR2A25A4D2G3 310 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SMAPO00193 183 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 DSCR3O14972 297 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ZBTB14O43829 449 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SRPX2O60687 465 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 CNOT3O75175 753 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 PDGFAP04085 211 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 CASRP41180 1078 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ELK3P41970 407 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 PGDP52209 483 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ITGA8P53708 1063 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 RRADP55042 308 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ARL4CP56559 192 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 FOXL2P58012 376 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 KCNC4Q03721 635 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SSPNQ14714 243 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 HIF1AQ16665 826 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 WASHC2DQ5SRD0 308 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 YOD1Q5VVQ6 348 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 HIBCHQ6NVY1 386 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 CYHR1Q6ZMK1 362 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 UBE2R2Q712K3 238 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 MED25Q71SY5 747 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 RNF44Q7L0R7 432 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 MRGPREQ86SM8 312 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 TMEM102Q8N9M5 508 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 OR2Y1Q8NGV0 311 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ZNF480Q8WV37 535 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SNF8Q96H20 258 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 ZFYVE21Q9BQ24 234 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SLC22A11Q9NSA0 550 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 TAS2R13Q9NYV9 303 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 SLC17A6Q9P2U8 582 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 TNRC6AQ8NDV7 1962 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-259ENST00000638114 LOC105369274A0A096LPK9 316 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 LOC102723532A0A0G2JNH3 316 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 FITM1A5D6W6 292 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 GFYI3L273 518 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 EIF3FO00303 357 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 FANCGO15287 622 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 CCNDBP1O95273 360 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 PIM1P11309 404 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 ITGAXP20702 1163 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 GABRB3P28472 473 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 RGS4P49798 205 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 CSRP3P50461 194 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 FAM214AQ32MH5 1076 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 THEMIS2Q5TEJ8 643 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 ICE2Q659A1 982 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 LRRC8EQ6NSJ5 796 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 MRPL14Q6P1L8 145 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 KIAA0408Q6ZU52 694 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 CNTN4Q8IWV2 1026 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 OR4N4Q8N0Y3 316 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 METTL27Q8N6F8 245 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 FKBP10Q96AY3 582 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 LRRC39Q96DD0 335 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 IP6K3Q96PC2 410 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 KRT12Q99456 494 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 CLMPQ9H6B4 373 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 PLAC1Q9HBJ0 212 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 G3BP2Q9UN86 482 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 PCDHGA9Q9Y5G4 932 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
CACNA1A-259ENST00000638114 HYKKA2RU49 373 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 A6NL46 340 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 EFCAB8A8MWE9 144 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 E7ENX8 843 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 PEX12O00623 359 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 AHSGP02765 367 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 SKIV2L2P42285 1042 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 CDKN2DP55273 166 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 TIAL1Q01085 375 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 TAP2Q03519 686 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 PRDX1Q06830 199 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 TEDDM1Q5T9Z0 273 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 TRMT10BQ6PF06 316 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 OVCH1Q7RTY7 1134 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 ANKMY2Q8IV38 441 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 MYO1HQ8N1T3 1032 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 EEF1AKMT1Q8WVE0 214 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 PTERQ96BW5 349 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 WDR83Q9BRX9 315 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 ENAMQ9NRM1 1142 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 UTP6Q9NYH9 597 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 TEX264Q9Y6I9 313 aa16.02■□□□□ 0.16
CACNA1A-259ENST00000638114 PCSK5Q92824 1860 aa16.01■□□□□ 0.15
CACNA1A-259ENST00000638114 ANKRD12Q6UB98 2062 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms