RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TMIEQ8NEW7 156 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 OR8D1Q8WZ84 308 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 FAM162AQ96A26 154 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 CPPED1Q9BRF8 314 aaPredicted RBP20.86■□□□□ 0.93
CLN6-224ENST00000638076 UGT2B28Q9BY64 529 aa20.86■□□□□ 0.93
CLN6-224ENST00000638076 EDDM13A0A1B0GTR0 161 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 H3BM21 787 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 DEAF1O75398 565 aaPredicted RBP20.85■□□□□ 0.93
CLN6-224ENST00000638076 ETS2P15036 469 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 PTPN6P29350 595 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 THEMIS2Q5TEJ8 643 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 OR4F3Q6IEY1 312 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 SLC30A9Q6PML9 568 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 RBM44Q6ZP01 1051 aaKnown RBP20.85■□□□□ 0.93
CLN6-224ENST00000638076 C7orf61Q8IZ16 206 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 C10orf111Q8N326 155 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 NUS1Q96E22 293 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 FCRL1Q96LA6 429 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 ASB16Q96NS5 453 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 OR2AG1Q9H205 316 aa20.85■□□□□ 0.93
CLN6-224ENST00000638076 NUP210Q8TEM1 1887 aaPredicted RBP20.85■□□□□ 0.93
CLN6-224ENST00000638076 GRXCR1A8MXD5 290 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 PCSK2P16519 638 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 NR1H2P55055 460 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 ZNF33BQ06732 778 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 ELP6Q0PNE2 266 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 RAET1GQ6H3X3 334 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 GRHL2Q6ISB3 625 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 SYT12Q8IV01 421 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 NPAS3Q8IXF0 933 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 OR56A3Q8NH54 315 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 DGCR14Q96DF8 476 aaKnown RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 FAM120BQ96EK7 910 aaKnown RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 HHIPQ96QV1 700 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 EPHX3Q9H6B9 360 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 FAM220BPB1ANY3 271 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 UPK1AO00322 258 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 SCELO95171 688 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 CA3P07451 260 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 HOXB9P17482 250 aaPredicted RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 EN2P19622 333 aaPredicted RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 HNF4AP41235 474 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 KIR3DL1P43629 444 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 MAPK9P45984 424 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 ZNF658BQ4V348 819 aaPredicted RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 OTUD3Q5T2D3 398 aaPredicted RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 TRAPPC5Q8IUR0 188 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 CFAP206Q8IYR0 622 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 GALNT15Q8N3T1 639 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 KIAA1958Q8N8K9 716 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 NCSTNQ92542 709 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 FBXL20Q96IG2 436 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 HAUS8Q9BT25 410 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 CLK4Q9HAZ1 481 aaKnown RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 SGK2Q9HBY8 427 aa20.84■□□□□ 0.93
CLN6-224ENST00000638076 SPATA6Q9NWH7 488 aaPredicted RBP20.84■□□□□ 0.93
CLN6-224ENST00000638076 HEPACAM2A8MVW5 462 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 H0YIV9 168 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 RFXANKO14593 260 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 MMP20O60882 483 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 CLIC3O95833 236 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 C6P13671 934 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 ADRB3P13945 408 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 PRPS1L1P21108 318 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 GPR1P46091 355 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 GPM6BQ13491 265 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 ELAVL3Q14576 367 aaKnown RBP20.83■□□□□ 0.93
CLN6-224ENST00000638076 ZNF234Q14588 700 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 ADRM1Q16186 407 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 NKG7Q16617 165 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 CALHM3Q86XJ0 350 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 KLHDC8AQ8IYD2 350 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 DHRSXQ8N5I4 330 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 OR7A2PQ8NGA2 310 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 NCLNQ969V3 563 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 TMBIM1Q969X1 311 aa20.83■□□□□ 0.93
CLN6-224ENST00000638076 LILRB5O75023 590 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 PRSS23O95084 383 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 C1orf105O95561 183 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 SNAP29O95721 258 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 RPL10P27635 214 aaKnown RBP20.83■□□□□ 0.92
CLN6-224ENST00000638076 MTHFRP42898 656 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 GZMMP51124 257 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 SF1Q15637 639 aaKnown RBP20.83■□□□□ 0.92
CLN6-224ENST00000638076 BCL7AQ4VC05 210 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 CYBRD1Q53TN4 286 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 PDE12Q6L8Q7 609 aaKnown RBP20.83■□□□□ 0.92
CLN6-224ENST00000638076 TRIML2Q8N7C3 387 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 SPDYE1Q8NFV5 336 aaPredicted RBP20.83■□□□□ 0.92
CLN6-224ENST00000638076 ERLEC1Q96DZ1 483 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 SLC47A1Q96FL8 570 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 ZCCHC2Q9C0B9 1178 aaKnown RBP20.83■□□□□ 0.92
CLN6-224ENST00000638076 FADS3Q9Y5Q0 445 aa20.83■□□□□ 0.92
CLN6-224ENST00000638076 TCF20Q9UGU0 1960 aaKnown RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 LZTS3O60299 673 aaPredicted RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 CREG1O75629 220 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 NRIP1P48552 1158 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 MTAPQ13126 283 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 NAIF1Q69YI7 327 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms