RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 HIF3AQ9Y2N7 669 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 FARS2O95363 451 aaKnown RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 THPOP40225 353 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 POU4F2Q12837 409 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 DCST2Q5T1A1 773 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 ZNF584Q8IVC4 421 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MCEMP1Q8IX19 187 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 ZNF101Q8IZC7 436 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 UBE2J2Q8N2K1 259 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CLIP4Q8N3C7 705 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 SMARCD2Q92925 531 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 EPYCQ99645 322 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 TMEM134Q9H6X4 195 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 NANSQ9NR45 359 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RIMKLBQ9ULI2 386 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 IL23RQ5VWK5 629 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 XAGE5Q8WWM1 108 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CD180Q99467 661 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 P2RX2Q9UBL9 471 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 HEBP2Q9Y5Z4 205 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 TREHO43280 583 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 HCRTR2O43614 444 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RAB31Q13636 194 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RFTN1Q14699 578 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CEP97Q8IW35 865 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 FTMTQ8N4E7 242 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 STK35Q8TDR2 534 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CEP41Q9BYV8 373 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CACNB4O00305 520 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 PRAF2O60831 178 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 OXSR1O95747 527 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MAOAP21397 527 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MPIP34949 423 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MSX2P35548 267 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 OAZ1P54368 228 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 VSX2P58304 361 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RAET1GQ6H3X3 334 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MED27Q6P2C8 311 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 SUSD6Q92537 303 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 PNPLA2Q96AD5 504 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 KCNQ5Q9NR82 932 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 LRFN1Q9P244 771 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 KLF11O14901 512 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RDH16O75452 317 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 RPS12P25398 132 aaKnown RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 CACNG1Q06432 222 aa14.78□□□□□ -0.04
UBE3A-227ENST00000638011 MKKSQ9NPJ1 570 aaPredicted RBP14.78□□□□□ -0.04
UBE3A-227ENST00000638011 ANXA4P09525 319 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-227ENST00000638011 RHDQ02161 417 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 PON2Q15165 354 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 NDUFAF5Q5TEU4 345 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 MAP4K3Q8IVH8 894 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 AGXT2Q9BYV1 514 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 AMD1P17707 334 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 MPSTP25325 297 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 TMPRSS11BQ86T26 416 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 MRPL41Q8IXM3 137 aaKnown RBP14.77□□□□□ -0.04
UBE3A-227ENST00000638011 CRAMP1Q96RY5 1269 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 RGS9O75916 674 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-227ENST00000638011 CXCL8P10145 99 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 CETPP11597 493 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 GK2Q14410 553 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-227ENST00000638011 PTPN20Q4JDL3 420 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 UBE2R2Q712K3 238 aaPredicted RBP14.77□□□□□ -0.04
UBE3A-227ENST00000638011 NINJ1Q92982 152 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 SNTG2Q9NY99 539 aa14.77□□□□□ -0.04
UBE3A-227ENST00000638011 ELFN1P0C7U0 828 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 HOXB9P17482 250 aaPredicted RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 ANKRD22Q5VYY1 191 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 HNRNPABQ99729 332 aaKnown RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 HHLA1C9JL84 531 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 IL12BP29460 328 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 TMCO2Q7Z6W1 182 aaPredicted RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 COMMD7Q86VX2 200 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 IFNL1Q8IU54 200 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 DEFB106AQ8N104 65 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 ERLEC1Q96DZ1 483 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 SEMA3CQ99985 751 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 TRAV19A0A0A6YYK7 116 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 A8MVJ9 347 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 ZNF670-ZNF695F2Z2N8 137 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 FNDC3BQ53EP0 1204 aaKnown RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 LRIF1Q5T3J3 769 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 DOK6Q6PKX4 331 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 COX18Q8N8Q8 333 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 OR10G2Q8NGC3 310 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 TAAR8Q969N4 342 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 CNOT11Q9UKZ1 510 aaKnown RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 TLR4O00206 839 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 PROM1O43490 865 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 H1F0P07305 194 aaKnown RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 H2AFB2P0C5Z0 115 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 XRCC1P18887 633 aaPredicted RBP14.77□□□□□ -0.05
UBE3A-227ENST00000638011 ALDH3B1P43353 468 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 NR4A2P43354 598 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 FNTBP49356 437 aa14.77□□□□□ -0.05
UBE3A-227ENST00000638011 ZNF132P52740 706 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms