RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 VPS50Q96JG6 964 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 AGAP4Q96P64 663 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 ZNF304Q9HCX3 659 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 SOX13Q9UN79 622 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 NTNG1Q9Y2I2 539 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 CSAG2Q9Y5P2 127 aa17.64■□□□□ 0.41
CLN6-220ENST00000637450 TCRBV7S3A2A0A539 114 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 A1L4Q6 167 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 OR2A25A4D2G3 310 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 PFDN6O15212 129 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 NIPSNAP2O75323 286 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 LDLRP01130 860 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 ESR1P03372 595 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 YBX1P67809 324 aaKnown RBP17.63■□□□□ 0.41
CLN6-220ENST00000637450 HIF1AQ16665 826 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 TUBB8Q3ZCM7 444 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 RNF187Q5TA31 235 aaPredicted RBP17.63■□□□□ 0.41
CLN6-220ENST00000637450 PRMT9Q6P2P2 845 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 OR9A1PQ8NGU1 263 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 DNAJB14Q8TBM8 379 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 LHPPQ9H008 270 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 GALPQ9UBC7 116 aa17.63■□□□□ 0.41
CLN6-220ENST00000637450 POLEQ07864 2286 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 EIF2S1P05198 315 aaKnown RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 ZGLP1P0C6A0 271 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 ERGP11308 486 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CHRM3P20309 590 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CMPK1P30085 196 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CARSP49589 748 aaKnown RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 OCA2Q04671 838 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 KLC1Q07866 573 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 Q0VFX4 171 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 NAA25Q14CX7 972 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 KCTD19Q17RG1 926 aaPredicted RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 PRTGQ2VWP7 1150 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 ANKRD20A4Q4UJ75 823 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 IRAK1BP1Q5VVH5 260 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 KIAA0930Q6ICG6 404 aaPredicted RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 ZNF662Q6ZS27 426 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 LURAP1LQ8IV03 231 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 STT3BQ8TCJ2 826 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 COG1Q8WTW3 980 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 FAM136AQ96C01 138 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 MIEF2Q96C03 454 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 ZFYVE21Q9BQ24 234 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 MESP1Q9BRJ9 268 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 DPH7Q9BTV6 452 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CRB3Q9BUF7 120 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 AGPAT4Q9NRZ5 378 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 HOMER3Q9NSC5 361 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 STOX2Q9P2F5 926 aaPredicted RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 ZNF282Q9UDV7 671 aaPredicted RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 NOVA2Q9UNW9 492 aaKnown RBP17.62■□□□□ 0.41
CLN6-220ENST00000637450 SLC5A6Q9Y289 635 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CRYL1Q9Y2S2 319 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CNTRLQ7Z7A1 2325 aa17.62■□□□□ 0.41
CLN6-220ENST00000637450 CENPEQ02224 2701 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 IGLV3-12A0A075B6K2 115 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 ARHGEF33A8MVX0 844 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 MYO1CO00159 1063 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 AVILO75366 819 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 PSIP1O75475 530 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 OGNP20774 298 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 TSFMP43897 325 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 EMP3P54852 163 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 ELOAQ14241 798 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 MUM1Q2TAK8 710 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 ACSBG2Q5FVE4 666 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 ARMC3Q5W041 872 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 ATG9BQ674R7 924 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 SMPDL3AQ92484 453 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 C10orf90Q96M02 699 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 PLCD4Q9BRC7 762 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 ACAT2Q9BWD1 397 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 LZTFL1Q9NQ48 299 aa17.61■□□□□ 0.41
CLN6-220ENST00000637450 TSR3Q9UJK0 312 aaKnown RBP17.61■□□□□ 0.41
CLN6-220ENST00000637450 H0YGG7 62 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 CEP104O60308 925 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 CLDN1O95832 211 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 HPP00738 406 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 PKMP14618 531 aaKnown RBP17.6■□□□□ 0.41
CLN6-220ENST00000637450 MAGEA6P43360 314 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 ARF3P61204 181 aaPredicted RBP17.6■□□□□ 0.41
CLN6-220ENST00000637450 KCNJ11Q14654 390 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 ARHGAP19Q14CB8 494 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 KLHL38Q2WGJ6 581 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 NEPROQ6NW34 567 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 SUSD1Q6UWL2 747 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 CENPUQ71F23 418 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 MAMDC2Q7Z304 686 aaPredicted RBP17.6■□□□□ 0.41
CLN6-220ENST00000637450 KCNMB4Q86W47 210 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 CILP2Q8IUL8 1156 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 PRELID2Q8N945 189 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 ST6GALNAC3Q8NDV1 305 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 C5orf34Q96MH7 638 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 LMF1Q96S06 567 aa17.6■□□□□ 0.41
CLN6-220ENST00000637450 EPS8L2Q9H6S3 715 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms