RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GDF7Q7Z4P5 450 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CYP4Z1Q86W10 505 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 LONP2Q86WA8 852 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NME9Q86XW9 330 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PALB2Q86YC2 1186 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM90A1Q86YD7 464 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DCP2Q8IU60 420 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 CLVS1Q8IUQ0 354 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 LRRC8AQ8IWT6 810 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM58AQ8N1B3 248 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ARHGAP18Q8N392 663 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FAM47BQ8NA70 645 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 C8orf58Q8NAV2 365 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 STKLD1Q8NE28 680 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NCOA7Q8NI08 942 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DTX3LQ8TDB6 740 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SH3RF2Q8TEC5 729 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PTPMT1Q8WUK0 201 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 WDR60Q8WVS4 1066 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 HMGB4Q8WW32 186 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FIG4Q92562 907 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ST6GALNAC6Q969X2 333 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 DUS3LQ96G46 650 aaKnown RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 NUDT11Q96G61 164 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 KLHL15Q96M94 604 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ZNF48Q96MX3 618 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 ZNF583Q96ND8 569 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 BTBD9Q96Q07 612 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 BBS4Q96RK4 519 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 NPY6RQ99463 290 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 EGFL8Q99944 293 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ALKBH7Q9BT30 221 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 ALG12Q9BV10 488 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MECRQ9BV79 373 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 IDI2Q9BXS1 227 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ANGPTL4Q9BY76 406 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PRRG3Q9BZD7 231 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 C6orf62Q9GZU0 229 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 MAGT1Q9H0U3 335 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 OPN3Q9H1Y3 402 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 OR51B6Q9H340 312 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 HRH4Q9H3N8 390 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 GAL3ST2Q9H3Q3 398 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SP140LQ9H930 580 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 USP29Q9HBJ7 922 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FSCN3Q9NQT6 498 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ZFP57Q9NU63 452 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 TMLHEQ9NVH6 421 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ALKBH4Q9NXW9 302 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CLDND1Q9NY35 253 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 OR6C3Q9NZP0 311 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 KCMF1Q9P0J7 381 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 GCNT4Q9P109 453 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SEMA5BQ9P283 1151 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ONECUT1Q9UBC0 465 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 HEY2Q9UBP5 337 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 UBQLN2Q9UHD9 624 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CRLS1Q9UJA2 301 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FBXL7Q9UJT9 491 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 FBXW11Q9UKB1 542 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ADAM29Q9UKF5 820 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ADAM28Q9UKQ2 775 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CDH9Q9ULB4 789 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PSMD13Q9UNM6 376 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 MGAT4BQ9UQ53 548 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CDYLQ9Y232 598 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 SH3GLB1Q9Y371 365 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 RHBDD3Q9Y3P4 386 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PTPRGP23470 1445 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 ASTN2O75129 1339 aaPredicted RBP2.92□□□□□ -1.94
VIM-210ENST00000637053 MAP3K15Q6ZN16 1313 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 CDHR2Q9BYE9 1310 aa2.92□□□□□ -1.94
VIM-210ENST00000637053 PLB1Q6P1J6 1458 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RPAP1Q9BWH6 1393 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 A0A087WWL8 130 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 PNMA6EA0A0J9YXQ4 647 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C13orf42A0A1B0GVH6 325 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FAM240BA0A1B0GVZ2 78 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 A0A1W2PQ67 120 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 OR2W5A6NFC9 320 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 WIPF3A6NGB9 483 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C2orf71A6NGG8 1288 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 C5orf52A6NGY3 159 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 FAM90A8PA6NJQ4 464 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CD8B2A6NJW9 211 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 SDR42E2A6NKP2 422 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 A8MXQ7 604 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 ERVV-2B6SEH9 535 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 H3BQ06 376 aaPredicted RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 ABCD4O14678 606 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GRM6O15303 877 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GPAA1O43292 621 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 DHHO43323 396 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 GRID2O43424 1007 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 RNF13O43567 381 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 NDUFA2O43678 99 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 BUD23O43709 281 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 LIASO43766 372 aa2.91□□□□□ -1.94
VIM-210ENST00000637053 CCNT2O60583 730 aaKnown RBP2.91□□□□□ -1.94
VIM-210ENST00000637053 SELENOFO60613 162 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms