RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	PRSS44	E7EML9	344 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306		H7C4K7	107 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ARVCF	O00192	962 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM20B	O75063	409 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	NCK1	P16333	377 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	KEL	P23276	732 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	GADD45A	P24522	165 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	HOXA1	P49639	335 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CRADD	P78560	199 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FLI1	Q01543	452 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	EMX2	Q04743	252 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF273	Q14593	569 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	USP10	Q14694	798 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	VPS26B	Q4G0F5	336 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC39A12	Q504Y0	691 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	RAP1GAP2	Q684P5	730 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	BLOC1S3	Q6QNY0	202 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MON1A	Q86VX9	555 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SCN4B	Q8IWT1	228 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ADHFE1	Q8IWW8	467 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	RBFA	Q8N0V3	343 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	LILRB2	Q8N423	598 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM181A	Q8N9Y4	354 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	OR52H1	Q8NGJ2	320 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ITFG1	Q8TB96	612 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CD99L2	Q8TCZ2	262 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	C2orf15	Q8WU43	125 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FBXW5	Q969U6	566 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	C1orf74	Q96LT6	269 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZSWIM3	Q96MP5	696 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	WDFY2	Q96P53	400 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZIC5	Q96T25	663 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PELO	Q9BRX2	385 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	POMK	Q9H5K3	350 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC52A3	Q9NQ40	469 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CASS4	Q9NQ75	786 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ACSS2	Q9NR19	701 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	TMEM30A	Q9NV96	361 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	TMLHE	Q9NVH6	421 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	C14orf119	Q9NWQ9	140 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PTTG3P	Q9NZH4	202 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF224	Q9NZL3	707 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC23A1	Q9UHI7	598 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	LRFN2	Q9ULH4	789 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	HSPB11	Q9Y547	144 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PCDHB14	Q9Y5E9	798 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZFC3H1	O60293	1989 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM72C	H0Y354	149 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	KCNK1	O00180	336 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	BTN3A3	O00478	584 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	RGS5	O15539	181 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	VPS4B	O75351	444 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	EED	O75530	441 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ALDOC	P09972	364 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC35E2B	P0CK96	405 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FSHR	P23945	695 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	MAOB	P27338	520 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CA5A	P35218	305 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	TGFBR1	P36897	503 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	GEM	P55040	296 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CDH17	Q12864	832 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	HYAL2	Q12891	473 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	GRM3	Q14832	879 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	TSC22D1	Q15714	1073 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	TBCE	Q15813	527 aa	Predicted RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	GRK1	Q15835	563 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	COL28A1	Q2UY09	1125 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	DEFB115	Q30KQ5	88 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM214A	Q32MH5	1076 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM72A	Q5TYM5	149 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM72D	Q6L9T8	149 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM72B	Q86X60	149 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	RNF130	Q86XS8	419 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC22A9	Q8IVM8	553 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CENPL	Q8N0S6	344 aa	Predicted RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	C9orf62	Q8N4C0	152 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ZBTB44	Q8NCP5	570 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF540	Q8NDQ6	660 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CNIH3	Q8TBE1	160 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	SMG7	Q92540	1137 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	PTER	Q96BW5	349 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	INTS12	Q96CB8	462 aa	Known RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	TEKT5	Q96M29	485 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	WAC	Q9BTA9	647 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	MAGEB5	Q9BZ81	275 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	TMPRSS4	Q9NRS4	437 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	DCAF16	Q9NXF7	216 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM8A1	Q9UBU6	413 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ADGRE2	Q9UHX3	823 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	LEF1	Q9UJU2	399 aa	Predicted RBP	10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ACSL5	Q9ULC5	683 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	MAPRE3	Q9UPY8	281 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	KLK4	Q9Y5K2	254 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	CACNG2	Q9Y698	323 aa		10.48	□□□□□ -0.73
CHD2-223	ENST00000636306	ZCWPW2	A0A1B0GU75	182 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms