RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 BRD3Q15059 726 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 OR1C1Q15619 314 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 RNFT1Q5M7Z0 435 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 FCRLBQ6BAA4 426 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 TMEM211Q6ICI0 200 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 SPINK14Q6IE38 97 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 GALNTL5Q7Z4T8 443 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.2■□□□□ 0.34
CLN6-212ENST00000636020 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 TMEM178AQ8NBL3 297 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 ZUFSPQ96AP4 578 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 MBD6Q96DN6 1003 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 C18orf12Q96KH6 178 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 C10orf90Q96M02 699 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 MAK16Q9BXY0 300 aaKnown RBP17.2■□□□□ 0.34
CLN6-212ENST00000636020 C14orf105Q9NVL8 296 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 TRPC4Q9UBN4 977 aa17.2■□□□□ 0.34
CLN6-212ENST00000636020 HRNRQ86YZ3 2850 aaPredicted RBP17.2■□□□□ 0.34
CLN6-212ENST00000636020 LOC105369274A0A096LPK9 316 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 LOC102723532A0A0G2JNH3 316 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 TARM1B6A8C7 271 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 RASGRF2O14827 1237 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 ACRV1P26436 265 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 ST13P50502 369 aaKnown RBP17.19■□□□□ 0.34
CLN6-212ENST00000636020 SF1Q15637 639 aaKnown RBP17.19■□□□□ 0.34
CLN6-212ENST00000636020 CLEC9AQ6UXN8 241 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 SERPINA9Q86WD7 417 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 OR4N4Q8N0Y3 316 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 ZNF567Q8N184 647 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 FAM57AQ8TBR7 257 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 RND1Q92730 232 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 UTP23Q9BRU9 249 aaKnown RBP17.19■□□□□ 0.34
CLN6-212ENST00000636020 FSD1LQ9BXM9 530 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 TGIF2Q9GZN2 237 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 NUP62CLQ9H1M0 184 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 ANKRD10Q9NXR5 420 aa17.19■□□□□ 0.34
CLN6-212ENST00000636020 KLHL8Q9P2G9 620 aaPredicted RBP17.19■□□□□ 0.34
CLN6-212ENST00000636020 SLC5A10A0PJK1 596 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 CCL22O00626 93 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 KLK8O60259 260 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 AP2A2O94973 939 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 SP1P08047 785 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 INHBBP09529 407 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 CD9P21926 228 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 PTGER1P34995 402 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 ZNF140P52738 457 aaPredicted RBP17.18■□□□□ 0.34
CLN6-212ENST00000636020 EFNA3P52797 238 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 MSLNQ13421 630 aaPredicted RBP17.18■□□□□ 0.34
CLN6-212ENST00000636020 TAZQ16635 292 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 NAPRTQ6XQN6 538 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 CD163Q86VB7 1156 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 TAX1BP1Q86VP1 789 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 CLYBLQ8N0X4 340 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 FAM98AQ8NCA5 519 aaKnown RBP17.18■□□□□ 0.34
CLN6-212ENST00000636020 WFDC11Q8NEX6 87 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 TFB1MQ8WVM0 346 aaKnown RBP17.18■□□□□ 0.34
CLN6-212ENST00000636020 ELMO1Q92556 727 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 C19orf43Q9BQ61 176 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 YIPF2Q9BWQ6 316 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 HSD3B7Q9H2F3 369 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
CLN6-212ENST00000636020 CDC14AQ9UNH5 594 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 FAM169AQ9Y6X4 670 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 ATRQ13535 2644 aa17.18■□□□□ 0.34
CLN6-212ENST00000636020 NBEAL1Q6ZS30 2694 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 FAM237BA0A1B0GVD1 139 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 TPOP07202 933 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 PRSS56P0CW18 603 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 ZNF24P17028 368 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 ADSLP30566 484 aaPredicted RBP17.17■□□□□ 0.34
CLN6-212ENST00000636020 PTGS2P35354 604 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 DGKQP52824 942 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 DYNLT1P63172 113 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 FASTKQ14296 549 aaKnown RBP17.17■□□□□ 0.34
CLN6-212ENST00000636020 PLAG1Q6DJT9 500 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 SLC25A25Q6KCM7 469 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 RANBP10Q6VN20 620 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 CAMKMTQ7Z624 323 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 RFX6Q8HWS3 928 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 CCDC71Q8IV32 467 aaPredicted RBP17.17■□□□□ 0.34
CLN6-212ENST00000636020 AMER3Q8N944 861 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 OR2L8Q8NGY9 312 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 NUDT8Q8WV74 236 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 RMND5BQ96G75 393 aaPredicted RBP17.17■□□□□ 0.34
CLN6-212ENST00000636020 IL17FQ96PD4 163 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 NPAS2Q99743 824 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 MKKSQ9NPJ1 570 aaPredicted RBP17.17■□□□□ 0.34
CLN6-212ENST00000636020 LRFN1Q9P244 771 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 EDARQ9UNE0 448 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 L3MBTL1Q9Y468 752 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 KLK4Q9Y5K2 254 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 PRSS21Q9Y6M0 314 aa17.17■□□□□ 0.34
CLN6-212ENST00000636020 A0A0J9YVX5 310 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 SEC24DO94855 1032 aaPredicted RBP17.16■□□□□ 0.34
CLN6-212ENST00000636020 FKBP9O95302 570 aa17.16■□□□□ 0.34
CLN6-212ENST00000636020 CRTAMO95727 393 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms