RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NKAPQ8N5F7 415 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 AGBL5Q8NDL9 886 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 OR6C4Q8NGE1 309 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 RFWD2Q8NHY2 731 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 NCSTNQ92542 709 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 THOC1Q96FV9 657 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ELMO2Q96JJ3 720 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SIGLEC10Q96LC7 697 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 LRGUKQ96M69 825 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CSPG4P5Q96PW8 444 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 RAB3IPQ96QF0 476 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MRPL18Q9H0U6 180 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CATSPERBQ9H7T0 1116 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MANSC1Q9H8J5 431 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 KCNK13Q9HB14 408 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 OCIAD1Q9NX40 245 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 TAAR2Q9P1P5 351 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 RCOR3Q9P2K3 495 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ANKMY1Q9P2S6 941 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 LHX3Q9UBR4 397 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 AKAP6Q13023 2319 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CHD5Q8TDI0 1954 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ANKRD17O75179 2603 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 HMX2A2RU54 273 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MTSS1O43312 755 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 DUX1O43812 170 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SLC4A1P02730 911 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 TROVE2P10155 538 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 FGF3P11487 239 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 DESP17661 470 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CCND1P24385 295 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CCR10P46092 362 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 PAPOLAP51003 745 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CCNG1P51959 295 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SCAND1P57086 179 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MAXP61244 160 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 KCNAB2Q13303 367 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF235Q14590 738 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 BRAT1Q6PJG6 821 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 LIPIQ6XZB0 460 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CDHR3Q6ZTQ4 885 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 Q6ZVL8 140 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CYS1Q717R9 158 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CLNKQ7Z7G1 428 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 PSTKQ8IV42 348 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ZBTB34Q8NCN2 500 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CCDC110Q8TBZ0 833 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ASB12Q8WXK4 309 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 FBXW5Q969U6 566 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 KIAA1143Q96AT1 154 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 PTCD3Q96EY7 689 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 STAMBPL1Q96FJ0 436 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 CFAP36Q96G28 342 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 TCTN2Q96GX1 697 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SMIM14Q96QK8 99 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SLC38A3Q99624 504 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 PHPT1Q9NRX4 125 aaPredicted RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 ZC3H7BQ9UGR2 993 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 SUFUQ9UMX1 484 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 RPL26L1Q9UNX3 145 aaKnown RBP4.73□□□□□ -1.65
LINC00550-201ENST00000629293 HEY1Q9Y5J3 304 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 DOCK4Q8N1I0 1966 aa4.73□□□□□ -1.65
LINC00550-201ENST00000629293 MED13Q9UHV7 2174 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 IGHV5-10-1A0A0J9YXX1 117 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 A1L4Q6 167 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 HACD1B0YJ81 288 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TRIM49D1C9J1S8 452 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 EEF2KO00418 725 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 HNRNPCL1O60812 293 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SFTPCP11686 197 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 EZRP15311 586 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 RAB6AP20340 208 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 AGXTP21549 392 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SNRPNP63162 240 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 CDK18Q07002 472 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 PARP15Q460N3 678 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TEX44Q53QW1 395 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 MANEALQ5VSG8 457 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TIFABQ6ZNK6 161 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 LRRC6Q86X45 466 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TP53INP2Q8IXH6 220 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SHISA5Q8N114 240 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF610Q8N9Z0 462 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TEX19Q8NA77 164 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 C9orf43Q8TAL5 461 aaPredicted RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SCAMP4Q969E2 229 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 NUS1Q96E22 293 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 OXNAD1Q96HP4 312 aaPredicted RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 C16orf92Q96LL3 132 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 FAM111AQ96PZ2 611 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 EBNA1BP2Q99848 306 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 TSSK1BQ9BXA7 367 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 GSDMCQ9BYG8 508 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 SLC39A8Q9C0K1 460 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 XAB2Q9HCS7 855 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 EIF2B3Q9NR50 452 aaKnown RBP4.72□□□□□ -1.65
LINC00550-201ENST00000629293 DTLQ9NZJ0 730 aa4.72□□□□□ -1.65
LINC00550-201ENST00000629293 FBLN5Q9UBX5 448 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms