RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 TGM3Q08188 693 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 TRAF3Q13114 568 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 PEAR1Q5VY43 1037 aaPredicted RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 FRG2Q64ET8 278 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 PRR23BQ6ZRT6 265 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 TMPRSS11BQ86T26 416 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SYVN1Q86TM6 617 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 CARFQ8N187 725 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SRFBP1Q8NEF9 429 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 ZNF548Q8NEK5 533 aaPredicted RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 RFWD2Q8NHY2 731 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 PYCR2Q96C36 320 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 CMTM5Q96DZ9 223 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 WDR34Q96EX3 536 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 MAELQ96JY0 434 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 NSUN5Q96P11 429 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 QRFPRQ96P65 431 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 FRG2BQ96QU4 278 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SLC38A3Q99624 504 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SHCBP1LQ9BZQ2 653 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 C20orf27Q9GZN8 174 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 ZBTB26Q9HCK0 441 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SLC40A1Q9NP59 571 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 MRPS30Q9NP92 439 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SAR1AQ9NR31 198 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 TMEM184CQ9NVA4 438 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 DNAAF2Q9NVR5 837 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 NDE1Q9NXR1 346 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 ZNF490Q9ULM2 529 aaPredicted RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 EIF3LQ9Y262 564 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 WDR37Q9Y2I8 494 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 CFAP20Q9Y6A4 193 aaKnown RBP9.81□□□□□ -0.84
FOXCUT-201ENST00000628509 LRP4O75096 1905 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 REV3LO60673 3130 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 DYTNA2CJ06 578 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 A6NCN8 305 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 URADA6NGE7 173 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 LILRA5A6NI73 299 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 OR52A4PA6NMU1 304 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 B4DGG1 531 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 SCAMP1O15126 338 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 RSL1D1O76021 490 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 WNT1P04628 370 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ACPPP15309 386 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NPPBP16860 134 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 AMD1P17707 334 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 SLC19A1P41440 591 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 PIK3CBP42338 1070 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 GSTM5P46439 218 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ATP4BP51164 291 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 DUSP3P51452 185 aaPredicted RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ERVPABLB-1P60509 514 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ERVK-8P63133 956 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 BTKQ06187 659 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 PRDX1Q06830 199 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 DMWDQ09019 674 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NR6A1Q15406 480 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 SF1Q15637 639 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 CPSF6Q16630 551 aaKnown RBP eCLIP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ICE2Q659A1 982 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 CLEC6AQ6EIG7 209 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 OGFOD2Q6N063 350 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ZCCHC8Q6NZY4 707 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 SLC23A3Q6PIS1 610 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NXPE4Q6UWF7 544 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 MBOAT1Q6ZNC8 495 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 TMEM26Q6ZUK4 368 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ARL10Q8N8L6 244 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 OR52B6Q8NGF0 335 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 OR10G6Q8NH81 332 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ZUFSPQ96AP4 578 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ESAMQ96AP7 390 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 THAP11Q96EK4 314 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 THOC1Q96FV9 657 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 AHCYL2Q96HN2 611 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ZBTB18Q99592 522 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 DPYSL5Q9BPU6 564 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NLNQ9BYT8 704 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 ABCF3Q9NUQ8 709 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NLGN3Q9NZ94 848 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 NOP53Q9NZM5 478 aaKnown RBP9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 TAC3Q9UHF0 121 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 PPT2Q9UMR5 302 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 CAPN7Q9Y6W3 813 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 EML5Q05BV3 1969 aa9.8□□□□□ -0.84
FOXCUT-201ENST00000628509 C5orf42Q9H799 3197 aa9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 A0A088AWK7 358 aa9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 LRRC14BA6NHZ5 514 aa9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 FOXE1O00358 373 aaPredicted RBP9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 MANBAO00462 879 aa9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 TXNDC9O14530 226 aa9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 UBFD1O14562 309 aaKnown RBP9.79□□□□□ -0.84
FOXCUT-201ENST00000628509 PIP5K1BO14986 540 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms