RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 OR52A4PA6NMU1 304 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 E7EQ34 232 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 MANBAO00462 879 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CLGNO14967 610 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 UBDO15205 165 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 DCXO43602 365 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 VPS4BO75351 444 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 UNC5CO95185 931 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 EML2O95834 649 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 WNT1P04628 370 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 LBPP18428 481 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 HALP42357 657 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 NCALDP61601 193 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 IRF8Q02556 426 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 KLF10Q13118 480 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 LRP8Q14114 963 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 FZD2Q14332 565 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 KRT33BQ14525 404 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 ABRAXAS2Q15018 415 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TBCCQ15814 346 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 RPE65Q16518 533 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CPSF6Q16630 551 aaKnown RBP eCLIP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 GGTA1PQ4G0N0 100 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 ZNF542PQ5EBM4 170 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 XKR7Q5GH72 579 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 XKR6Q5GH73 641 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC30A9Q6PML9 568 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TSSK4Q6SA08 328 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SUSD1Q6UWL2 747 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC36A4Q6YBV0 504 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 NRROSQ86YC3 692 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 C2orf73Q8N5S3 287 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CPSF7Q8N684 471 aaKnown RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 L3MBTL4Q8NA19 623 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 OR2T11Q8NH01 316 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 EDAQ92838 391 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TUBGCP3Q96CW5 907 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 PTCD3Q96EY7 689 aaKnown RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 HSPA12BQ96MM6 686 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CAMK1GQ96NX5 476 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 HBEGFQ99075 208 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TUBB6Q9BUF5 446 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SGPP1Q9BX95 441 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SLC29A3Q9BZD2 475 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TCEAL2Q9H3H9 227 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 ZNF385DQ9H6B1 395 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 MVB12BQ9H7P6 319 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CCDC177Q9NQR7 707 aaPredicted RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TXLNGQ9NUQ3 528 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 SPATA7Q9P0W8 599 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 TBC1D29Q9UFV1 150 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 LNPEPQ9UIQ6 1025 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 DGKBQ9Y6T7 804 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 CAPN7Q9Y6W3 813 aa9.61□□□□□ -0.87
SOX2-OT-244ENST00000627738 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 A0A1W2PR77 199 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 PEX11AO75192 247 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ULK1O75385 1050 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ATP5HO75947 161 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 KRT6AP02538 564 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 KRT6BP04259 564 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 PRR35P0CG20 571 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ERGP11308 486 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 MTHFD1P11586 935 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 JUPP14923 745 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 AOC1P19801 751 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 CALB2P22676 271 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 PIK3R1P27986 724 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 MSX1P28360 303 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 CD38P28907 300 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 HSD17B2P37059 387 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 CPA2P48052 419 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 KRT6CP48668 564 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 RACK1P63244 317 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ILF3Q12906 894 aaKnown RBP eCLIP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 DOC2AQ14183 400 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ZRSR2Q15696 482 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 CYP2A13Q16696 494 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 SGO1Q5FBB7 561 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 THEMIS2Q5TEJ8 643 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 LIPJQ5W064 366 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 ABRAXAS1Q6UWZ7 409 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 LAYNQ6UX15 382 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 WASH2PQ6VEQ5 465 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 Q6ZSR9 355 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 CHSY3Q70JA7 882 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 PARGQ86W56 976 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 TMEFF1Q8IYR6 380 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 RGL4Q8IZJ4 473 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 SFRP1Q8N474 314 aa9.6□□□□□ -0.87
SOX2-OT-244ENST00000627738 MFSD2AQ8NA29 543 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms