RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 MED8Q96G25 268 aa19.53■□□□□ 0.72
PTCD3-220ENST00000627371 SGPP1Q9BX95 441 aa19.53■□□□□ 0.72
PTCD3-220ENST00000627371 PCBD2Q9H0N5 130 aa19.53■□□□□ 0.72
PTCD3-220ENST00000627371 PPCSQ9HAB8 311 aa19.53■□□□□ 0.72
PTCD3-220ENST00000627371 MRPS30Q9NP92 439 aaKnown RBP19.53■□□□□ 0.72
PTCD3-220ENST00000627371 KLHL20Q9Y2M5 609 aa19.53■□□□□ 0.72
PTCD3-220ENST00000627371 IQANK1A0A1B0GTG1 560 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 KLHL2O95198 593 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 TFEBP19484 476 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 GABRA4P48169 554 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 HNMTP50135 292 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 YBX1P67809 324 aaKnown RBP19.52■□□□□ 0.72
PTCD3-220ENST00000627371 ABATP80404 500 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 PRDX1Q06830 199 aaKnown RBP19.52■□□□□ 0.72
PTCD3-220ENST00000627371 NAE1Q13564 534 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-220ENST00000627371 FAM83EQ2M2I3 478 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.52■□□□□ 0.72
PTCD3-220ENST00000627371 THEMIS2Q5TEJ8 643 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 FCRL6Q6DN72 434 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 CAPN13Q6MZZ7 669 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-220ENST00000627371 ISCA2Q86U28 154 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 GPSM1Q86YR5 675 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 STAG3L4Q8TBR4 150 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 NXNL1Q96CM4 212 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 FCRL4Q96PJ5 515 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 EGFL8Q99944 293 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 VPS11Q9H270 941 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 SLC6A20Q9NP91 592 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 ABCF3Q9NUQ8 709 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 ANKMY1Q9P2S6 941 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 ZFHX4Q86UP3 3567 aa19.52■□□□□ 0.72
PTCD3-220ENST00000627371 CCDC189A1A4V9 331 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 TMEM150CB9EJG8 249 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-220ENST00000627371 TAF4O00268 1085 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 CDKL4Q5MAI5 379 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 LCTLQ6UWM7 567 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 TIFABQ6ZNK6 161 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 DNAJC22Q8N4W6 341 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 ZNF248Q8NDW4 579 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 DPH7Q9BTV6 452 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 ALG9Q9H6U8 611 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 RNF112Q9ULX5 631 aa19.51■□□□□ 0.71
PTCD3-220ENST00000627371 ANKRD11Q6UB99 2663 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-220ENST00000627371 IGKV1-8A0A0C4DH67 115 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 OR2A25A4D2G3 310 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 STMND1H3BQB6 276 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 HCRTR1O43613 425 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 KERAO60938 352 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 NUDT17P0C025 328 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 ACAP2Q15057 778 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 DEFB110Q30KQ9 67 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 TDRPQ86YL5 185 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 TCAIMQ8N3R3 496 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 MREGQ8N565 214 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 PDPRQ8NCN5 879 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 RHEBL1Q8TAI7 183 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 ALKBH8Q96BT7 664 aaKnown RBP19.5■□□□□ 0.71
PTCD3-220ENST00000627371 PYCR2Q96C36 320 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 RHBDF1Q96CC6 855 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 CABS1Q96KC9 395 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 ATOH8Q96SQ7 321 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 SPRY4Q9C004 299 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 RAXQ9Y2V3 346 aa19.5■□□□□ 0.71
PTCD3-220ENST00000627371 TMEM184BQ9Y519 407 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-220ENST00000627371 NCF1BA6NI72 391 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 NCF1CA8MVU1 366 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 RFPL1O75677 317 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 STK17BO94768 372 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 TIAF1O95411 115 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 LIPCP11150 499 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 COL6A2P12110 1019 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 NCF1P14598 390 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 EIF2S3P41091 472 aaKnown RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 RASA2Q15283 850 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PTCHD3Q3KNS1 767 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 ZC3H12BQ5HYM0 836 aaKnown RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 ZNF425Q6IV72 752 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PWWP2BQ6NUJ5 590 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 KLC3Q6P597 504 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PAQR7Q86WK9 346 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 ZFAND4Q86XD8 727 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 DTX1Q86Y01 620 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PLD6Q8N2A8 252 aaKnown RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 OR1L3Q8NH93 324 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 MZB1Q8WU39 189 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 N4BP2L2Q92802 583 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 GPR78Q96P69 363 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PLCD4Q9BRC7 762 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 HAUS8Q9BT25 410 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 ULBP3Q9BZM4 244 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 RRAGDQ9NQL2 400 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-220ENST00000627371 NUDT4Q9NZJ9 180 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 TBK1Q9UHD2 729 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 PLCL2Q9UPR0 1127 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 LAMA5O15230 3695 aa19.49■□□□□ 0.71
PTCD3-220ENST00000627371 NRP2O60462 931 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 CTSVO60911 334 aa19.48■□□□□ 0.71
PTCD3-220ENST00000627371 DLGAP3O95886 979 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms