RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 FAM131CQ96AQ9 280 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 VAPAQ9P0L0 249 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 CIDEBQ9UHD4 219 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 MAPRE3Q9UPY8 281 aa21.35■■□□□ 1.01
PNKP-220ENST00000627232 A0A096LPI6 279 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 TRBV5-3A0A0A0MS03 114 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 DFNA5O60443 496 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MYO1DO94832 1006 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 FCGR1AP12314 374 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 PRPS1L1P21108 318 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 TIE1P35590 1138 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 FOLH1Q04609 750 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 CYP4F3Q08477 520 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 SELPLGQ14242 412 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MAP7Q14244 749 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MTX3Q5HYI7 312 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 ATG9BQ674R7 924 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 HMBOX1Q6NT76 420 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MED27Q6P2C8 311 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 FAM83HQ6ZRV2 1179 aaPredicted RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 PAPD5Q8NDF8 572 aaKnown RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 NEIL2Q969S2 332 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 EME1Q96AY2 570 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 RAD51AP1Q96B01 352 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 ITCHQ96J02 903 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 CCDC115Q96NT0 180 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 TSSK3Q96PN8 268 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 EFCAB11Q9BUY7 163 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 A0A1W2PP55 124 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MTHFD1P11586 935 aaKnown RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 NPPBP16860 134 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 KELP23276 732 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 HRH2P25021 359 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 TACR1P25103 407 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 OR4D2P58180 307 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 MTPNP58546 118 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 TAP2Q03519 686 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 PLA2G4EQ3MJ16 856 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 DOK6Q6PKX4 331 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 RALGPS2Q86X27 583 aaPredicted RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 TRPV3Q8NET8 790 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 OR7G3Q8NG95 312 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 STARD8Q92502 1023 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 EZH1Q92800 747 aaPredicted RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 C11orf24Q96F05 449 aaPredicted RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 GABRG3Q99928 467 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 PAIP1Q9H074 479 aaKnown RBP21.34■■□□□ 1.01
PNKP-220ENST00000627232 SERGEFQ9UGK8 458 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 SCOCQ9UIL1 159 aa21.34■■□□□ 1.01
PNKP-220ENST00000627232 LAMA2P24043 3122 aaKnown RBP21.33■■□□□ 1.01
PNKP-220ENST00000627232 KMOO15229 486 aa21.33■■□□□ 1
PNKP-220ENST00000627232 TIPRLO75663 272 aa21.33■■□□□ 1
PNKP-220ENST00000627232 RPN2P04844 631 aa21.33■■□□□ 1
PNKP-220ENST00000627232 C1GALT1C1LP0DN25 315 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PIM1P11309 404 aaPredicted RBP21.33■■□□□ 1
PNKP-220ENST00000627232 ZNF26P17031 533 aaPredicted RBP21.33■■□□□ 1
PNKP-220ENST00000627232 NTSR1P30989 418 aa21.33■■□□□ 1
PNKP-220ENST00000627232 TRIM23P36406 574 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PHC1P78364 1004 aa21.33■■□□□ 1
PNKP-220ENST00000627232 SRSF11Q05519 484 aaKnown RBP21.33■■□□□ 1
PNKP-220ENST00000627232 DLX2Q07687 328 aaPredicted RBP21.33■■□□□ 1
PNKP-220ENST00000627232 ACSM2AQ08AH3 577 aa21.33■■□□□ 1
PNKP-220ENST00000627232 MTAPQ13126 283 aa21.33■■□□□ 1
PNKP-220ENST00000627232 LAPTM5Q13571 262 aa21.33■■□□□ 1
PNKP-220ENST00000627232 HTR4Q13639 388 aa21.33■■□□□ 1
PNKP-220ENST00000627232 STARD3Q14849 445 aa21.33■■□□□ 1
PNKP-220ENST00000627232 CYP51A1Q16850 503 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PAGE2BQ5JRK9 111 aa21.33■■□□□ 1
PNKP-220ENST00000627232 ACSM2BQ68CK6 577 aa21.33■■□□□ 1
PNKP-220ENST00000627232 GLYATQ6IB77 296 aa21.33■■□□□ 1
PNKP-220ENST00000627232 SDE2Q6IQ49 451 aa21.33■■□□□ 1
PNKP-220ENST00000627232 TMEM154Q6P9G4 183 aa21.33■■□□□ 1
PNKP-220ENST00000627232 TMPRSS11BQ86T26 416 aa21.33■■□□□ 1
PNKP-220ENST00000627232 DCUN1D3Q8IWE4 304 aa21.33■■□□□ 1
PNKP-220ENST00000627232 MSRB3Q8IXL7 192 aa21.33■■□□□ 1
PNKP-220ENST00000627232 LAS2Q8IYD9 372 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PPWD1Q96BP3 646 aaKnown RBP21.33■■□□□ 1
PNKP-220ENST00000627232 NSMCE2Q96MF7 247 aa21.33■■□□□ 1
PNKP-220ENST00000627232 ZNF583Q96ND8 569 aa21.33■■□□□ 1
PNKP-220ENST00000627232 MTERF1Q99551 399 aaKnown RBP21.33■■□□□ 1
PNKP-220ENST00000627232 SERHLQ9NQF3 203 aa21.33■■□□□ 1
PNKP-220ENST00000627232 CCDC177Q9NQR7 707 aaPredicted RBP21.33■■□□□ 1
PNKP-220ENST00000627232 ANAPC2Q9UJX6 822 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PPT2Q9UMR5 302 aa21.33■■□□□ 1
PNKP-220ENST00000627232 AURKCQ9UQB9 309 aa21.33■■□□□ 1
PNKP-220ENST00000627232 PCYT1BQ9Y5K3 369 aaPredicted RBP21.33■■□□□ 1
PNKP-220ENST00000627232 CROCCQ5TZA2 2017 aa21.32■■□□□ 1
PNKP-220ENST00000627232 A6NHS1 94 aa21.32■■□□□ 1
PNKP-220ENST00000627232 ANHXE9PGG2 379 aa21.32■■□□□ 1
PNKP-220ENST00000627232 AKAP10O43572 662 aa21.32■■□□□ 1
PNKP-220ENST00000627232 PI15O43692 258 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SMNDC1O75940 238 aaKnown RBP eCLIP21.32■■□□□ 1
PNKP-220ENST00000627232 NCK1P16333 377 aa21.32■■□□□ 1
PNKP-220ENST00000627232 GGT1P19440 569 aa21.32■■□□□ 1
PNKP-220ENST00000627232 FASP25445 335 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SEC13P55735 322 aa21.32■■□□□ 1
PNKP-220ENST00000627232 RPS21P63220 83 aaKnown RBP21.32■■□□□ 1
PNKP-220ENST00000627232 IRF4Q15306 451 aa21.32■■□□□ 1
PNKP-220ENST00000627232 SPIN4Q56A73 249 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms