RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CTU2Q2VPK5 515 aaKnown RBP2.85□□□□□ -1.95
VBP1-204ENST00000625964 C9orf152Q5JTZ5 239 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 KRT39Q6A163 491 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 ZNF613Q6PF04 617 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 SLC25A47Q6Q0C1 308 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 ZBTB49Q6ZSB9 765 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 DET1Q7L5Y6 550 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 PRPF39Q86UA1 669 aaKnown RBP2.85□□□□□ -1.95
VBP1-204ENST00000625964 IQCHQ86VS3 1027 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 OR4K1Q8NGD4 311 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 ZNF486Q96H40 463 aaPredicted RBP2.85□□□□□ -1.95
VBP1-204ENST00000625964 C10orf90Q96M02 699 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 USP28Q96RU2 1077 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 RBM4BQ9BQ04 359 aaKnown RBP2.85□□□□□ -1.95
VBP1-204ENST00000625964 CCDC3Q9BQI4 270 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 GPR88Q9GZN0 384 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 SPHK2Q9NRA0 654 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 MAN2C1Q9NTJ4 1040 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 CACNA1FO60840 1977 aa2.85□□□□□ -1.95
VBP1-204ENST00000625964 C15orf61A6NNL5 157 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 FPGTO14772 594 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 ACSL3O95573 720 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 SLC2A2P11168 524 aaPredicted RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 CD22P20273 847 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 AZGP1P25311 298 aaKnown RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 LHX1P48742 406 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 CSRP3P50461 194 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 LMO4P61968 165 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 PRPF4BQ13523 1007 aaKnown RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 ITGA7Q13683 1181 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 PTPRCAPQ14761 206 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 FASTKD1Q53R41 847 aaKnown RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 UGT3A1Q6NUS8 523 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 DOK6Q6PKX4 331 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 METTL7BQ6UX53 244 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 Q6ZRP5 223 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 LRRTM1Q86UE6 522 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 NDUFAF2Q8N183 169 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 BMPERQ8N8U9 685 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 OR1L3Q8NH93 324 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 ZNRF4Q8WWF5 429 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 CENPTQ96BT3 561 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 LINC00615Q96LM1 132 aaPredicted RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 C4orf45Q96LM5 186 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 NSMCE3Q96MG7 304 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 KRT12Q99456 494 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 SLF1Q9BQI6 1058 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 UPF3AQ9H1J1 476 aaKnown RBP2.84□□□□□ -1.95
VBP1-204ENST00000625964 TLE6Q9H808 572 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 CDH20Q9HBT6 801 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 MAN1B1Q9UKM7 699 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 WDR83OSQ9Y284 106 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 R4GN57 208 aa2.84□□□□□ -1.95
VBP1-204ENST00000625964 A0A1W2PR80 420 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 E9PQ18 207 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 SPRY1O43609 319 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 C22orf31O95567 290 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ATP5BP06576 529 aaKnown RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 ZSCAN5DPP0CG00 497 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 CYP11B2P19099 503 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 CYP2A7P20853 494 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 SP100P23497 879 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 ASCL1P50553 236 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ALDH3A2P51648 485 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 GUCY2DQ02846 1103 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 NECTIN1Q15223 517 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ZNF74Q16587 644 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 TCTE1Q5JU00 501 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ERMARDQ5T6L9 678 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 MFSD4BQ5TF39 518 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 LYSMD4Q5XG99 296 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 NAA16Q6N069 864 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 PLPPR4Q7Z2D5 763 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 KLHDC1Q8N7A1 406 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 SLC37A3Q8NCC5 494 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 OR10Q1Q8NGQ4 319 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ZNF519Q8TB69 540 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 MAPK15Q8TD08 544 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 APOBEC4Q8WW27 367 aaKnown RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 SLCO2A1Q92959 643 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 OTUB1Q96FW1 271 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 FAM71F1Q96KD3 344 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 CPNE1Q99829 537 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 PIGQQ9BRB3 760 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 MTMR12Q9C0I1 747 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 ZMYND12Q9H0C1 365 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 Q9H8V8 135 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 PANK4Q9NVE7 773 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 SYNDIG1LA6NDD5 238 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 PTGESO14684 152 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 DIAPH2O60879 1101 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 SLCO2B1O94956 709 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 CELF2O95319 508 aaKnown RBP2.83□□□□□ -1.96
VBP1-204ENST00000625964 MYBL1P10243 752 aa2.83□□□□□ -1.96
VBP1-204ENST00000625964 EEF1B2P24534 225 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms