RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 KBTBD2Q8IY47 623 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 OR4N4Q8N0Y3 316 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 C8orf44Q96CB5 159 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 CABS1Q96KC9 395 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-215ENST00000625617 C10orf90Q96M02 699 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 LMF1Q96S06 567 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 BAG1Q99933 345 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-215ENST00000625617 ZFYVE21Q9BQ24 234 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 MESP1Q9BRJ9 268 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 P2RY12Q9H244 342 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 CHRAC1Q9NRG0 131 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 SPATA7Q9P0W8 599 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 PAK5Q9P286 719 aa13.81□□□□□ -0.2
TUBB3-215ENST00000625617 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
TUBB3-215ENST00000625617 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
TUBB3-215ENST00000625617 NSG1A0A0A6YYJ2 146 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 DYTNA2CJ06 578 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 OR2A25A4D2G3 310 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■□□ 16.7
TUBB3-215ENST00000625617 HNRNPRO43390 633 aaKnown RBP13.8□□□□□ -0.2
TUBB3-215ENST00000625617 KLHL18O94889 574 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 UQCRHP07919 91 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 STSP08842 583 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 ETS1P14921 441 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 FDXRP22570 491 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 CMPK1P30085 196 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 SESN2P58004 480 aaPredicted RBP13.8□□□□□ -0.2
TUBB3-215ENST00000625617 CRADDP78560 199 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 SNX1Q13596 522 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 INAQ16352 499 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 PCID2Q5JVF3 399 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 RPUSD3Q6P087 351 aaKnown RBP13.8□□□□□ -0.2
TUBB3-215ENST00000625617 OR1N1Q8NGS0 311 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 OR2A1Q8NGT9 310 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 MARVELD3Q96A59 401 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
TUBB3-215ENST00000625617 DESI2Q9BSY9 194 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 ENTPD4Q9Y227 616 aa13.8□□□□□ -0.2
TUBB3-215ENST00000625617 NUP210LQ5VU65 1888 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 IGLV3-12A0A075B6K2 115 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 A0A0U1RQJ8 604 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 A0A1B0GUH1 482 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 PHF2O75151 1096 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 VPS26AO75436 327 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 JRKO75564 520 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 PRR35P0CG20 571 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 COX6A1P12074 109 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 ATP5DP30049 168 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 DSG2Q14126 1118 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 NAA30Q147X3 362 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-215ENST00000625617 PRTGQ2VWP7 1150 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 VWA2Q5GFL6 755 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 CTSL3PQ5NE16 218 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 ATG9BQ674R7 924 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 FJX1Q86VR8 437 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 SLC13A5Q86YT5 568 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-215ENST00000625617 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 BRIX1Q8TDN6 353 aaKnown RBP13.79□□□□□ -0.2
TUBB3-215ENST00000625617 MVB12AQ96EY5 273 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 DPH7Q9BTV6 452 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 ACAT2Q9BWD1 397 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 IL22Q9GZX6 179 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 EIF2B3Q9NR50 452 aaKnown RBP13.79□□□□□ -0.2
TUBB3-215ENST00000625617 C14orf105Q9NVL8 296 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 PTGFRNQ9P2B2 879 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 STOX2Q9P2F5 926 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-215ENST00000625617 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 CDC14AQ9UNH5 594 aa13.79□□□□□ -0.2
TUBB3-215ENST00000625617 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 IDSB3KWA1 339 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 CXCR2P25025 360 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 SOX11P35716 441 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 EMP2P54851 167 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 EMP3P54852 163 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 EEF1A2Q05639 463 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 RNF187Q5TA31 235 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 MRNIPQ6NTE8 343 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 NDUFAF7Q7L592 441 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 SRRM1Q8IYB3 904 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 SIRT6Q8N6T7 355 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 NR4A3Q92570 626 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 YIPF2Q9BWQ6 316 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 MRPS30Q9NP92 439 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 RIC8BQ9NVN3 520 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
TUBB3-215ENST00000625617 SNRNP200O75643 2136 aaKnown RBP13.78□□□□□ -0.2
TUBB3-215ENST00000625617 A0A1W2PQ72 361 aa13.77□□□□□ -0.21
TUBB3-215ENST00000625617 ARHGEF33A8MVX0 844 aa13.77□□□□□ -0.21
TUBB3-215ENST00000625617 PRSS44E7EML9 344 aa13.77□□□□□ -0.21
TUBB3-215ENST00000625617 H0YGG7 62 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms